Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g02431 ATGGAAGATTCTTCACAAAACTCAAAATGGAAGTATCATGTTTTCTTGAGTTTTAGGGGAGAAGACACACGCTTAGGCTTTACTGATCACCTATATGCAGCGTTGGCGCGTAAAAGTATAATAACTTTCAGAGATGACGAAGAACGAGCAAGAGGTGAAGTAATCTCACAAAAACTCCTCCTTGCAATTGAGGAATCTCTCTCAGCAGTTGTTTTAATCTCCGAAAACTATGCTACCTCAGCTTGGTGTTTGGATGAGTTAGTCAAGATTCTCGAATCCAAACGTTTGCCAGGACAACAAGTGTTCCCAGTCTTCTATGGCATAGATCCCTCCGATGTAAGGAATCAAAGGGGAAGTTTTGCTGAAGCTTTTAGGAAACATGATGAAAAATTTACTGAAAGCAAAGAGAAGGTGAAAAGGTGGAGAGATGCATTGAGAGAGGTTGCCAACTTATCCGGGTGGGATTCTAAGGATAAGATTAGAGGATGTTTGTTTCATAGGGATATGGGTATGGGTGGGATAGGTAAAACAACTCTTGCTACTGTTCTCTTCAAGAAAATCAGAAGCCGATTAGATGTAGGAATGGTAATTGAAACATTAAGCCAAGGAAAGGATAGCTTAAGAAACCTTTTATCCAACAAAAAGgttcttcttgttcttgatGATGTAAGTTCCAAAAGCGAAATTGAAAATTTGGCTGGAAGCGAAGCATGGTTTGGTCAAAGGAGTAGAATAATAGTTACAACTAGGGATAAGCACTTGTTGATTTCGCACATTGTATTGTTTGAAATGTATGAGAGTAAAATCTTAAATAAGAGTGAATCCCTTCAACTTTTTTGTGAAAAAGCATTTAAAGAAGATGCACCTAAAGAGGGTTATATGGAGTTGTCTAAAATTGTGGTCGAATATGCTCGAGGCCTCCCTTTGACTCTCGAAGTGTTGGGTTCTTTTCTTTGTGGAAGAAGTGTATTTGATTGGGAAGAtgctttaatcaaaattaaagaatTTCCGCATGATGATATCATAAACAAACTTAGAATAAGCTATGACATGTTAGAAGATGAACACAAGACCATATTTCTAGATATTGCCTGCTTTTTTAAGGGATGA 1110 0.3676 MEDSSQNSKWKYHVFLSFRGEDTRLGFTDHLYAALARKSIITFRDDEERARGEVISQKLLLAIEESLSAVVLISENYATSAWCLDELVKILESKRLPGQQVFPVFYGIDPSDVRNQRGSFAEAFRKHDEKFTESKEKVKRWRDALREVANLSGWDSKDKIRGCLFHRDMGMGGIGKTTLATVLFKKIRSRLDVGMVIETLSQGKDSLRNLLSNKKVLLVLDDVSSKSEIENLAGSEAWFGQRSRIIVTTRDKHLLISHIVLFEMYESKILNKSESLQLFCEKAFKEDAPKEGYMELSKIVVEYARGLPLTLEVLGSFLCGRSVFDWEDALIKIKEFPHDDIINKLRISYDMLEDEHKTIFLDIACFFKG 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g02431 369 Pfam TIR domain 11 158 IPR000157 GO:0007165
Tsu03g02431 369 Pfam NB-ARC domain 203 337 IPR002182 GO:0043531
Tsu03g02431 369 Gene3D - 269 353 IPR042197 -
Tsu03g02431 369 PANTHER DISEASE RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 194 369 - -
Tsu03g02431 369 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 170 363 IPR027417 -
Tsu03g02431 369 PANTHER DISEASE RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 7 158 - -
Tsu03g02431 369 Gene3D - 5 187 IPR035897 -
Tsu03g02431 369 PRINTS Disease resistance protein signature 165 180 - -
Tsu03g02431 369 PRINTS Disease resistance protein signature 304 318 - -
Tsu03g02431 369 SMART till_3 11 151 IPR000157 GO:0007165
Tsu03g02431 369 SUPERFAMILY Toll/Interleukin receptor TIR domain 3 154 IPR035897 -
Tsu03g02431 369 ProSiteProfiles TIR domain profile. 10 173 IPR000157 GO:0007165
Tsu03g02431 369 Gene3D - 188 259 IPR027417 -
Tsu03g02431 369 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 7 158 IPR044974 GO:0006952
Tsu03g02431 369 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 194 369 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g02431 Tsu-Chr3 28169147 28171192 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu03g02431 170 369 WRKY Transcription Factor Family AT5G45050 36.404 5.24e-34 131
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g02431 - - mtr:MTR_3g080470 580.482
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu03g02431 03 28169147 28171192 Tsu03g02431 03 28169147 28171192 ECH