Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g02411 ATGTTGTGCTACTACTACATTTTCTTTGctattttctttctctcatttttcttcaaTAGAATAAGACTATCTCATAAATAtccaaaaaatcatacttcaaacttCTCCACTTCTACTCACACCCCTCCTTCATACCCTATCATAGGTTGCCTTATATCTTTCTACAAAAACCGTCGTAGTCTTCTAGATTTTTACACTCATCATCTCTCTCAATCTCCGACTCAAACCATCCTCCTTAACCGCCTTGGTGCCCGTCGAACCATCATAACCGCCAACCCTCTTAATGTCGAATATATCCTCAAAACTAATTTCACCAACTTCCCTAAAGGAAAACCCTTCACTGAAATCCTCGGTGACCTTCTTGGTTGCGGTATATTCAACGTAGATGGTAATTTATGGTCAAAACAACGTAAGTTAGCCAGCCATGAATTCACAACGAGGTCGCTCAAAGACTTCGTTGCCAAAACACTTGAAGATGAAGTTCAACATAGACTTATTCCATTGCTTGAATTGGCTTCTGATGGTAATCATATAATTGATATGCAAGATGTTTTAAGGAGACTCGCGTTTGAAATTGTGTGTAAAGTTTCACTTGGTTATGATCCTTGTTGTTTAGATTTATCTAAACCCTTGCCACCCCTTTTGTCGGCGTTCGACAAAGCTTCCGAGATAAGTGCAATGCGTGCGGCTTCaccattttatttgatttggaaGTTCAAGAGGATGCTTAATGTAGGATCTGAGAAATCACTTAAAGAAGCTGTTAGTCTTGTTCATGAATCAGTGAATGAGATaataaggaagaagaaaaaagaaattagtgaaaaaaataatattgttagtGGGAGTGATTTGTTGACAAAGTTGTTGGAGGCTGGGAATGATGAAATGATGGTCCGAGATATGGTTATTAGTATGATCATGGCGGGGAGAGACACGACATCGGCGGCTATGACGTGGCTTCTTTGGTTGTTGTCAAAGAATCCAAGCAAAGAGGAATTGATAGTGAAAGGAGTGAGGCAAGTTTTTGGAGGaaaaaataatgatgatgagtttGAGCTAATGAGGTCTTTTGATTATGAAGGTTTGAAAGAGATGAAGTATTTGAAAGCATCTTTGTGTGAGTCAATGAGGTTGTATCCACCGGTGGCATGGGATTCGAAGCATGCCATCGGCGATGACATGTTGCCGGACGGAACTAGGGTTGGAAAAGGTGATAGGGTGACTTATTTTCCATATGGGATGGGGAGGATGGAAGCTTTATGGGGAAAAGATTGGTATGAGTTTAAACCGGACCGGTGGTTCGATGAACCGGTGGGAAAAGAGGATAACAATGGAGTTTTGAAAGTTGTGAGTCCTTACAAGTTTTCGGTTTTTCAGGCTGGTCCAAGAGTTTGCCTTGGAAAAGATATGGCTTTTATTCAAATGCAATATGTTGTGGCTTCAATTCTAAATCGGTTTGAATTTAAGCCGGTGTCTATTGACCAACCAATTTTTGTTCCTTTTCTTACTGCTTATATGGCTGGTGGGTTCAAAGTGAGAGTTCACAAAAGagtttcaaaatga 1566 0.3729 MLCYYYIFFAIFFLSFFFNRIRLSHKYPKNHTSNFSTSTHTPPSYPIIGCLISFYKNRRSLLDFYTHHLSQSPTQTILLNRLGARRTIITANPLNVEYILKTNFTNFPKGKPFTEILGDLLGCGIFNVDGNLWSKQRKLASHEFTTRSLKDFVAKTLEDEVQHRLIPLLELASDGNHIIDMQDVLRRLAFEIVCKVSLGYDPCCLDLSKPLPPLLSAFDKASEISAMRAASPFYLIWKFKRMLNVGSEKSLKEAVSLVHESVNEIIRKKKKEISEKNNIVSGSDLLTKLLEAGNDEMMVRDMVISMIMAGRDTTSAAMTWLLWLLSKNPSKEELIVKGVRQVFGGKNNDDEFELMRSFDYEGLKEMKYLKASLCESMRLYPPVAWDSKHAIGDDMLPDGTRVGKGDRVTYFPYGMGRMEALWGKDWYEFKPDRWFDEPVGKEDNNGVLKVVSPYKFSVFQAGPRVCLGKDMAFIQMQYVVASILNRFEFKPVSIDQPIFVPFLTAYMAGGFKVRVHKRVSK 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g02411 521 PRINTS P450 superfamily signature 309 326 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g02411 521 PRINTS P450 superfamily signature 371 382 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g02411 521 PRINTS P450 superfamily signature 457 466 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g02411 521 PRINTS P450 superfamily signature 466 477 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g02411 521 PANTHER CYTOCHROME P450 94B3 31 517 - -
Tsu03g02411 521 PRINTS E-class P450 group I signature 298 315 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g02411 521 PRINTS E-class P450 group I signature 318 344 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g02411 521 PRINTS E-class P450 group I signature 456 466 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g02411 521 PRINTS E-class P450 group I signature 466 489 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g02411 521 PANTHER CYTOCHROME P450 31 517 - -
Tsu03g02411 521 SUPERFAMILY Cytochrome P450 42 518 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g02411 521 Gene3D Cytochrome P450 28 521 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g02411 521 Pfam Cytochrome P450 42 497 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g02411 Tsu-Chr3 27764663 27766228 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu03g02411 38 518 Cytochrome P450 AT3G48520 61.123 0.0 594
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g02411 K20665 - gmx:100800427 662.144