Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g02377 ATGGCGCGGCTCCTCGCGAAGCTGGCGCTAATCGTGTCAATTCTTACATTTCTCTTCTCTCCGTCGCATTCCGCTGTATTCAGCGTAGATCTAGGCTCGGAATCGCTCAAAGTCGCCGTCGTAAACCTAAAACCAGGTCAAACTCCGATCTCAGTCGCGATCAATGAGATGTCGAAACGGAAATCACCGGTGTTAGTTTCATTCCACGACGGAGATCGTCTCCTCGGCGAGGAAGCAGCCGGTTTAGTCGCTCGGTATCCACAGAAAGTTTATTCTCAAATGAGAGACCTAATAGGGAAACCCTACGTTTCTGTTAAGAATTTTCTAGATTCAATGTACTTACCTTTCGAAGCGAAGGAGGATTCTTCAAGAGGCACTGTTAATTTCGTTGTAGACAAAAACGGAACTGAGTATTCGCCTGAGGAATTGGTTGCCATGGTTTTGACTTACGCTGCGAATTTGGCTGAGTTTCATTCGAAGATTCCTATTAAAGACGCAGTGATTGCTGTTCCACCTTATTTTGGACAAGCTGAACGGAGAGGATTGCTTCAGGCAGCGGAGTTAGCCGGGATTAATGTTCTTTCGTTGATTAATGAGTATTCCGGTGCGGCGTTGCAGTATGGGATTGATAAGGATTTCTCAAATGAATCAAGGCATGTTGTTTTTTATGATATGGGTTCTAGTAGTACCTATGCCGCACTTGTGTATTTTTCCTCTTATAAGAGTAAAGAGTATGGGAAGACAGTTTCAGTGAATCAGTTTCAGGTCAAGGATGTGCGTTGGAACCCTGAGCTAGGCGGTCAGCATATGGAAATGCGATTGGTAGAGTATTTTGCCAATGAATTCAATGCACAAGTTGGTGGTGGAATAGATGTGAGAAAGTTTCCTAAGGCTATGGCTAAGTTAAAGAAACAGGTTAAACGGACAAAAGAAATTCTTAGTGCAAACACTGCAGCTCCCATTTCAGTTGAGTCTCTTCATGGTGATTTGGACTTCAGGAGCACAATAACCCGCGAGAAATTTGAAGAGCTTTGTGAAGATATATGGGAAAAATCTCTGTTACCGTTGAAAGAGTTGCTCGAGCATTCAGGCTTGTCAACAGATCAAATATACGCAGTGGAGTTAATTGGAGGTGCTACCAGAGTGCCAAAATTACAGGCTAAGCTTCAAGGGTTCCTTGGTAGAAAAGAACTTGATAGACATCTCGACGCTGATGAAGCAATCGTTCTTGGTGCTGCTCTGCATGCTGCAAATATAAGTGATGGAATCAAATTAAACCGCAAACTAGGAATGGTCGATGGTTCCTTATATGAGTTTGTGGTTGAATTGGATGGTCCTGATCTTCTGAAAAGTGAAAGTTCAAGGCAGTTACTTGTACCACGAATGAAGAAACTCCCGAGCAAGATGTTCAGATCCTTTAATCATGACAAAGATTTTGAAGTTTCACTAGCTTATGAAAGTGAACATCATTTGCCACCTGGTGTTACCTCTCCCTTAATTGCTCAATACCAAATATCTGGTTTAACAGATGCGAGCGGGAAATACTCATCTCGGAATCTGTCGTCCCCCATTAAGGCAAATGTCCATTTCTCTCTTAGTAGAAGTGGAATTCTTTCTCTGGATCGGGCAGATGCTGTTGTTGAAATAACAGAGTGGGTGGAAGTTCCCAGGAAGAACTTGACCGTAGAGAATTCAACTATTTCGTCAAATGTAACAGATGAATCTAGTGCTACGAACAATTCTGAGGAAAACAGTGAAGGTGTGCAAAGTGATAGTGGTAATAGTAAGGCATCTAACACGAGTGCAGAAGAGCAAACTGCTGCTGAACCTGCTACAGAGAGAAAGCTGAAAAAACGGACCTTTAGGGTACCATTAAAGATTGTTGAGAAGCTAACAGGATCAGGGATGTCTCTATCGAAAGATTTTCTTGCTGAAgctaaaacaaaattacaagCGCTAGACAAAAAAGACGCAGAAAGGAAAAGGACAGCTgagtttaaaaataatttagaaggttatatatatactactaaGGAAAAGATTGAAACTCTTGAGGAGTTTGAAAAAGTTTCTACAAGTGAGGAACGCCAGTCCTTTGTTGGGAAGCTTGATGAGGTGCAAGATTGGTTATATACAGATGGCGAAGATGCCAACGCTACAGAGTTTGAAGAGCGTCTAGATCAGTTAAAATCTGTTGGAGATCCAATTTTCTTCAGGTTAAAAGAGCTTACAGCTCGACCAGCGGCAGTTGAGCATGCCTATAAATACATTGATGAGCTGAAACAGATTGTAGAAGAGTGGAAAGCAAAGAAGTCTTGGCTTCCAAAAGAACGAGTAGATGAgGTGATTAATGTTGCAGAAAAGTTAAAGAACTGGTTGGATGAGAAAGAAACTGAGCAAAAGAAGTAA 2409 0.4126 MARLLAKLALIVSILTFLFSPSHSAVFSVDLGSESLKVAVVNLKPGQTPISVAINEMSKRKSPVLVSFHDGDRLLGEEAAGLVARYPQKVYSQMRDLIGKPYVSVKNFLDSMYLPFEAKEDSSRGTVNFVVDKNGTEYSPEELVAMVLTYAANLAEFHSKIPIKDAVIAVPPYFGQAERRGLLQAAELAGINVLSLINEYSGAALQYGIDKDFSNESRHVVFYDMGSSSTYAALVYFSSYKSKEYGKTVSVNQFQVKDVRWNPELGGQHMEMRLVEYFANEFNAQVGGGIDVRKFPKAMAKLKKQVKRTKEILSANTAAPISVESLHGDLDFRSTITREKFEELCEDIWEKSLLPLKELLEHSGLSTDQIYAVELIGGATRVPKLQAKLQGFLGRKELDRHLDADEAIVLGAALHAANISDGIKLNRKLGMVDGSLYEFVVELDGPDLLKSESSRQLLVPRMKKLPSKMFRSFNHDKDFEVSLAYESEHHLPPGVTSPLIAQYQISGLTDASGKYSSRNLSSPIKANVHFSLSRSGILSLDRADAVVEITEWVEVPRKNLTVENSTISSNVTDESSATNNSEENSEGVQSDSGNSKASNTSAEEQTAAEPATERKLKKRTFRVPLKIVEKLTGSGMSLSKDFLAEAKTKLQALDKKDAERKRTAEFKNNLEGYIYTTKEKIETLEEFEKVSTSEERQSFVGKLDEVQDWLYTDGEDANATEFEERLDQLKSVGDPIFFRLKELTARPAAVEHAYKYIDELKQIVEEWKAKKSWLPKERVDEVINVAEKLKNWLDEKETEQKK 802
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g02377 802 CDD HYOU1-like_NBD 28 417 - -
Tsu03g02377 802 PANTHER HSC70CB, ISOFORM G-RELATED 19 802 - -
Tsu03g02377 802 Gene3D - 92 146 - -
Tsu03g02377 802 PANTHER HEAT SHOCK 70 KDA PROTEIN 17 19 802 - -
Tsu03g02377 802 Pfam Hsp70 protein 27 738 IPR013126 GO:0005524|GO:0140662
Tsu03g02377 802 Gene3D - 29 417 - -
Tsu03g02377 802 ProSitePatterns Heat shock hsp70 proteins family signature 3. 373 387 IPR018181 -
Tsu03g02377 802 MobiDBLite consensus disorder prediction 566 615 - -
Tsu03g02377 802 SUPERFAMILY Actin-like ATPase domain 217 418 IPR043129 -
Tsu03g02377 802 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 427 575 IPR029047 -
Tsu03g02377 802 MobiDBLite consensus disorder prediction 566 607 - -
Tsu03g02377 802 Gene3D Actin; Chain A, domain 4 266 351 - -
Tsu03g02377 802 PRINTS 70kDa heat shock protein signature 25 38 - -
Tsu03g02377 802 PRINTS 70kDa heat shock protein signature 57 69 - -
Tsu03g02377 802 PRINTS 70kDa heat shock protein signature 523 539 - -
Tsu03g02377 802 PRINTS 70kDa heat shock protein signature 166 186 - -
Tsu03g02377 802 PRINTS 70kDa heat shock protein signature 370 386 - -
Tsu03g02377 802 PRINTS 70kDa heat shock protein signature 402 422 - -
Tsu03g02377 802 SUPERFAMILY Actin-like ATPase domain 24 211 IPR043129 -
Tsu03g02377 802 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 665 747 IPR029048 -
Tsu03g02377 802 Gene3D - 212 399 - -
Tsu03g02377 802 Gene3D - 638 752 IPR029048 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g02377 Tsu-Chr3 27080902 27088723 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu03g02377 27 544 Calmodulin-binding Proteins AT3G12580 28.571 3.33e-61 217
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g02377 K09486 - gmx:100786898 1335.09