Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g02371 ATGAAGAGAAATTTTTGTTTGGATTCATCATCCCATAAATCAATgaaTGGGGGGTTGAACGTAAACAAGcaacttgttttcaacattCCTCACCACAAGTTTGAAGAAAAGGAACTTCAGgCTAGAGTGATGATATGGTTGGCAAGTCAAGAAATGGAAGAAAAGAATGGTAGCAAAGGATCAACACCAACACTATCCCTTTCATTGCAACCTCGAGCATTATTAATGCATACCTCACATGGCTTTTCCGTAAAGCGATCTCTTCAAAATTTCcttgagaagagaaagaaaaggatTCAATGTCACGTTGTAACTCATGATAATAGTAGTACAAATTAG 339 0.3245 MKRNFCLDSSSHKSMNGGLNVNKQLVFNIPHHKFEEKELQARVMIWLASQEMEEKNGSKGSTPTLSLSLQPRALLMHTSHGFSVKRSLQNFLEKRKKRIQCHVVTHDNSSTN 112
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g02371 112 PANTHER DIVERGENT CCT MOTIF PROTEIN 1 104 - -
Tsu03g02371 112 Pfam Jas motif 85 100 IPR018467 -
Tsu03g02371 112 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 1 104 IPR040390 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu03g02371 39 106 Tify Gene Family AT1G30135 42.667 1.96e-07 44.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Tsu03g02371 Jas_motif 1.8e-05 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g02371 - K01931 mtr:MTR_3g081210 153.68