Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g02351 atGAAGAGGGCTATCTCGGTGGGATCTTTAGAGGGAAGAGTTGTGATAGAACTCGAAAACGCGAGCCTACTTACTCCTTCTTCATTTCCCATAAAAAATGTATCCTTTGAAGAAGATTCACCAATTGGTCATGAATATGAGAATTTCTCACAAGATGTAATAAAATTAAGAAGTAAGGTGCTTAGTAGTATAAAAGTTGTAGTCCTCTCAACCAAGATAAACTTACTCTTGCCTTTTGGTCCCATGGCAATTTTGATAGATAAATTGTATCATAGTCATGGTTGGGTCTTTCTCTTCAGCTTATTAGGCATTATACCCTTGGCCGAGCGATTAGGCTATACAACGGAGCAACTAGCTTTCTTTACCGGACCGGCAGTTGGTGGACTTTTATATGCGACATTTGGAAATGCAACAGAGCTAATTATATCAATTCACGCTCTAAAAAGTGGTTTGATTCATCTTGTTCAACAATCGCTACTAGGCTCAATTTTGTCTAACTTGTTGCTGGTACTTGGATGCGCATTCTTTGCTGGTGGATTAGTATTTCATAAGAGAGAACAAGTATTTAACCATGCAGATGCTGGTGTGGATTTCGGATTATTATTGATGGCGGTAATGGGACTATTATTTCCAGCAGTTCTTCATGCTACACAAACAGAATTAGAATATGGGAAATCTCAGTTATCTCTttcaagatttactagttgcaTTATGCTTGTGGCATATGCTTCCTATATAGTGTTTCAAGTGAAGAATCTGAAGAATTTACAAGTTCCAGATGATGAGgACAAGAGTTTCAATGAAGATACATCAAATGATGAAGAAGCTCCTGAGATTTCAATGTGGGAATCAATGATATGGATTTCAATCTTAACAGGAGGTATATCTATCTTGTCAGAATACTTGGTTAACACCATAGAGGGGGCATCAAAAGAGTTTGAAATGCCTAAGTCATTTCTTAGTGTAATTCTTCTTCCAGTAATTGGAAATGCTGCAGAGCATGTTGGAGCTGTTATGTTTGCTGTCAAAGACAAACTTGACATATCGCTGGGCGTGGCTGTAGGATcttcaattcaaatatcaatGTTTGTTATTCCATTTTGTGTGGTTGCTGGATGGATGATTGATTGCCCTATGGACTTGAATTTTCAGCCTTTTGAGACAACTTCACTTTTCATGTCAGTTATCATAGTTGCCTTCATGTTGCAAAATGGAACTTCAAACTACTTTAAAGGGATAGTGCTCATTCTTTGCTATTTGGTAGTTTCTGCAAGTTTTTTTGAACACATTGATCCTATGTCAGTTGaAAATAATCCCTCAACTGCTGGTTAG 1332 0.3664 MKRAISVGSLEGRVVIELENASLLTPSSFPIKNVSFEEDSPIGHEYENFSQDVIKLRSKVLSSIKVVVLSTKINLLLPFGPMAILIDKLYHSHGWVFLFSLLGIIPLAERLGYTTEQLAFFTGPAVGGLLYATFGNATELIISIHALKSGLIHLVQQSLLGSILSNLLLVLGCAFFAGGLVFHKREQVFNHADAGVDFGLLLMAVMGLLFPAVLHATQTELEYGKSQLSLSRFTSCIMLVAYASYIVFQVKNLKNLQVPDDEDKSFNEDTSNDEEAPEISMWESMIWISILTGGISILSEYLVNTIEGASKEFEMPKSFLSVILLPVIGNAAEHVGAVMFAVKDKLDISLGVAVGSSIQISMFVIPFCVVAGWMIDCPMDLNFQPFETTSLFMSVIIVAFMLQNGTSNYFKGIVLILCYLVVSASFFEHIDPMSVENNPSTAG 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g02351 443 Gene3D - 124 262 IPR044880 -
Tsu03g02351 443 Gene3D - 270 426 IPR044880 -
Tsu03g02351 443 Pfam Sodium/calcium exchanger protein 286 422 IPR004837 GO:0016021|GO:0055085
Tsu03g02351 443 Pfam Sodium/calcium exchanger protein 95 250 IPR004837 GO:0016021|GO:0055085
Tsu03g02351 443 TIGRFAM caca2: calcium/proton exchanger 60 427 - -
Tsu03g02351 443 PANTHER VACUOLAR CATION/PROTON EXCHANGER 7 438 - -
Tsu03g02351 443 TIGRFAM cax: calcium/proton exchanger 76 427 IPR004798 GO:0006816|GO:0015369
Tsu03g02351 443 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 7 438 IPR004713 GO:0006812|GO:0008324|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g02351 Tsu-Chr3 26615128 26619352 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu03g02351 57 432 Antiporters AT1G55730 67.287 0.0 520
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g02351 K07300 - jre:109000743 556.214
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu03g02351 03 26615128 26619352 Tsu03g02351 03 26615128 26619352 ECH