Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g02339 ATGGCTATGAATAACAATATCTTTTTATTGCTGTATAAGTTGGCTTTATCTttgattaaaagaaaaagaaagagttcTGGCATTGCAATTTACAGTTCATTGATTAAGAAAGATGAGGATTTAGCTTTCTTGAAGAAAAAAGTCGGTTTAACTTCGTTGGAATTCATTGGAAGAGGTGGATGTGGTGAGGTTTACAAAGTGGAATTACCGGGTAGTAATGGTAAAATGATTGCTATTAAGAAGATGCGACCAATTAAGTCGTGGAAtgttttagaagaaattaagTCGGAGATTGACACGGTCGGTCATATTCGTCATTTGAACATTTTGCCTCTTTTGGCTCATATTTCTAGACCTGATTGCCATTACCTTGTGTATGAGTTCATGAAGAATGGAAATCTGCAGGATATTGTGACCAAATTTGAAAGAGGTGAAGCGGAGTTGGATTGGTTGTCAAGGCATAAGATTGCGCTTGGTATCGCGGCCGGTCTTGAATACCTACACATGAGCCATAGTCCGCGTATAATTCATCGAGATCTCAAGCCTGCAAACATTCTCCTTGATGATGATATGGAAGCTAGGATTTCAAATTTTGGACTTGCAACAACAATGCCTAATGGGCAGACAGATATGAGTGCATCACGTGTGGCTGGCACTGTGGGATATATCGCGCCTGAGTATCATCAATTATTCACATTCAGTGACAAGTGTGACATTTATAGCTTTGGTGTTACGCTTGGTGTTTTGGTGATGGGAAAACTTCCTTCTGATGAGTTTTTTCAGCACACAGATGAGATGAGTTTGGTTAGGTGGATGAGAAATATCATGACTTCAGATAATCCAAAGGATGCAATTGATACAAGGCTTATAGGTAATGGTTATGAGGAACAAATGCTTGAGGTTTTGAAGATTGCCTGTTTTTGCACCATGGATAATCCGAAGGAGAGGCCTAATAGTAAGAATGTTAGGACTATGTTATATCAAATCAAGCACTAG 996 0.3765 MAMNNNIFLLLYKLALSLIKRKRKSSGIAIYSSLIKKDEDLAFLKKKVGLTSLEFIGRGGCGEVYKVELPGSNGKMIAIKKMRPIKSWNVLEEIKSEIDTVGHIRHLNILPLLAHISRPDCHYLVYEFMKNGNLQDIVTKFERGEAELDWLSRHKIALGIAAGLEYLHMSHSPRIIHRDLKPANILLDDDMEARISNFGLATTMPNGQTDMSASRVAGTVGYIAPEYHQLFTFSDKCDIYSFGVTLGVLVMGKLPSDEFFQHTDEMSLVRWMRNIMTSDNPKDAIDTRLIGNGYEEQMLEVLKIACFCTMDNPKERPNSKNVRTMLYQIKH 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g02339 331 ProSitePatterns Serine/Threonine protein kinases active-site signature. 175 187 IPR008271 GO:0004672|GO:0006468
Tsu03g02339 331 Pfam Protein kinase domain 52 322 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu03g02339 331 Gene3D Phosphorylase Kinase; domain 1 44 128 - -
Tsu03g02339 331 SUPERFAMILY Protein kinase-like (PK-like) 50 329 IPR011009 -
Tsu03g02339 331 ProSiteProfiles Protein kinase domain profile. 50 331 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu03g02339 331 Gene3D Transferase(Phosphotransferase) domain 1 129 331 - -
Tsu03g02339 331 SMART serkin_6 50 328 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu03g02339 331 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE SERINE/THREONINE/TYROSINE-PROTEIN KINASE SOBIR1 7 330 - -
Tsu03g02339 331 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 7 330 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g02339 Tsu-Chr3 26435154 26436193 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu03g02339 7 331 Receptor kinase-like Gene Family AT2G31880 65.976 6.43e-166 475
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-2 Tsu03g02339 Pkinase 7.1e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g02339 - - gmx:100811980 490.345