Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g02337 ATGGCCTTAATGGCtaagaaaaataacttatttttcttcttatcaTTTTTGTCTCTTCTTTTTTCCATTCATGCTAAACTCCAACTTCATCCTTCAGACACAAAAGCTCTCATAACTCTCAAAAACAACCTCGGACTCAACAACCTTAACACAACAAATCACCCGTGTAATGCTGAGGGTGTGTTTTGTGAGAGAAGACTCAATAACAATGAAAGCTATTCCCTCAGAGTAACAAAACTTgttttcaaatcaaaacaattgAGAGGAACACTTTCTTCAGCTATTGGAAAACTTACAGAGCTCAAAGAACTTTCTCTTTCAAACAACAAACTCGTTGACCGAATTCCACCTTCCATAGTTGACTGTAGAAAGCTTGAACTTCTTAACCTTGCTAATAATCTTTTCTCTGGTGAAGTTCCTTCCGAATTACCTTCTCTCATTCGTCTTCGTTTTCTTGATATCTCCGGGAATAAACTCTCTGGAAACTTGAATTTCCTTCGTTATTTTCCCAATCTGGAAACTCTCTCTGTTGCTGACAATCACTTTACAGGGAGAGTTCCTGCTTCTGTTCGTTCTTTTCGCAATCTTAGACAGTTTAACTTCTCTGGTAACCGTTTTCTTGAAGGCGTGCCGGTCAATCAAAAGCTTCTTGAATATCAAGATACTGATAATAATGTTCCTAAACGCTATATCCTTGCTGAGAATTCAAATTCAAGTTCACCAAGGAGGAATATACATCACTCTCCAGCAGGTGCTCCAGCTCCTGGTCCTGCAGCTGCTAAACAAAAGCACAAGAAGAGTAGGAGGAAGCTAGCTGGATGGATTCTTGGGTTTATAGCCGGAGCATTCGCCGGAATACTTTCCGGTTTTgtgttttctttgttgtttaagTTGGCTTTGGCTTTGGTTAAAGGAAAAGGAAAGGGTTCTGGTCCTGCAATTTATAGTTCATTGATTAAGAAAGCTGAGGATTTAGCTTTCTTGGAGAAAGAAGACGGCTTAGCTTCGTTGGAAATCATTGGAAAAGGTGGATGTGGTGAGGTTTACAAGGCAGAATTACCAGGAAGTAATGGTAAAATGATTGCTATCAAGAAGATTATTCAGCCACCTAAGGATGCAGCTGAGTTAGCTGAAGAAGATAGTAAGATTTTGCACAATAAGATGCGGCAAATTAAGTCAGAGATTGATACCGTTGGTCAGATTCGTCATCGAAACCTTTTGCCTTTGTTGGCTCATCTTTCTAGACCTGATTGTCATTACCTTGTGTATGAGTACATGAAGAATGGTAGTTTGCAGGATATGTTGACCAAAGTTGAAAGAGGTGAAGCGGAGTTGGATTGGTTGTCAAGGCATAAAATTGCACTTGGTATTGCAGCTGGTCTTGAATACCTTCACACGAGCCATAGTCCGCGTATAATTCATCGAGATCTCAAGCCTGCAAACATTCTTCTTGATGATGATATGGAAGCTAGGATTGCGGATTTTGGACTTGCAAAAGCAATGCCTGATGCACAGACGCATATCAGTACTTCGAAAGTGGCTGGCACTGTGGGATATATCGCGCCTGAGTATCATCAGATATTCAAATTCAGTGACAAGTGTGACATATATAGCTTTGGTGTTATTCTTGGTGTTTTGGTGATGGGAAAACTTCCTTCTGATGACTTTTTTCAGCACACGGACGAGATGAGTTTGGTCAAGTGGATGAGAAATACTATAGTTTCAGAAAATCCAAAGGACGCAATTGATGGAAGGCTCATTGGTAATGGTTTTGAGGAACAAATGCTTCTGGTTTTGAAGATTGCCTGCTTTTGCACCATGGATAATCCTAAGGAGAGGCCTGACAGTAAGAATGTTAGGATTATGTTGTACCAAATTAAGCACTAG 1887 0.3906 MALMAKKNNLFFFLSFLSLLFSIHAKLQLHPSDTKALITLKNNLGLNNLNTTNHPCNAEGVFCERRLNNNESYSLRVTKLVFKSKQLRGTLSSAIGKLTELKELSLSNNKLVDRIPPSIVDCRKLELLNLANNLFSGEVPSELPSLIRLRFLDISGNKLSGNLNFLRYFPNLETLSVADNHFTGRVPASVRSFRNLRQFNFSGNRFLEGVPVNQKLLEYQDTDNNVPKRYILAENSNSSSPRRNIHHSPAGAPAPGPAAAKQKHKKSRRKLAGWILGFIAGAFAGILSGFVFSLLFKLALALVKGKGKGSGPAIYSSLIKKAEDLAFLEKEDGLASLEIIGKGGCGEVYKAELPGSNGKMIAIKKIIQPPKDAAELAEEDSKILHNKMRQIKSEIDTVGQIRHRNLLPLLAHLSRPDCHYLVYEYMKNGSLQDMLTKVERGEAELDWLSRHKIALGIAAGLEYLHTSHSPRIIHRDLKPANILLDDDMEARIADFGLAKAMPDAQTHISTSKVAGTVGYIAPEYHQIFKFSDKCDIYSFGVILGVLVMGKLPSDDFFQHTDEMSLVKWMRNTIVSENPKDAIDGRLIGNGFEEQMLLVLKIACFCTMDNPKERPDSKNVRIMLYQIKH 628
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g02337 628 SMART serkin_6 334 625 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu03g02337 628 Gene3D Ribonuclease Inhibitor 145 228 IPR032675 -
Tsu03g02337 628 Coils Coil 374 394 - -
Tsu03g02337 628 Gene3D Ribonuclease Inhibitor 32 144 IPR032675 -
Tsu03g02337 628 SUPERFAMILY L domain-like 50 209 - -
Tsu03g02337 628 Pfam Leucine rich repeat 100 159 IPR001611 GO:0005515
Tsu03g02337 628 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 8 628 - -
Tsu03g02337 628 Gene3D Phosphorylase Kinase; domain 1 323 425 - -
Tsu03g02337 628 Pfam Protein kinase domain 337 580 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu03g02337 628 ProSitePatterns Serine/Threonine protein kinases active-site signature. 472 484 IPR008271 GO:0004672|GO:0006468
Tsu03g02337 628 Gene3D Transferase(Phosphotransferase) domain 1 426 628 - -
Tsu03g02337 628 MobiDBLite consensus disorder prediction 236 263 - -
Tsu03g02337 628 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE KINASE 8 628 - -
Tsu03g02337 628 ProSiteProfiles Protein kinase domain profile. 334 628 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu03g02337 628 SUPERFAMILY Protein kinase-like (PK-like) 328 626 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g02337 Tsu-Chr3 26422270 26424653 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu03g02337 1 628 Receptor kinase-like Gene Family AT2G31880 61.742 0.0 783
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-2 Tsu03g02337 Pkinase 2e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g02337 - - gmx:100811980 869.381
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu03g02337 03 26422270 26424653 Tsu03g02337 03 26422270 26424653 ECH