Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g02324 ATGTTGGAAGGAAAGATGTTTCAATATCTACCATCATTTATGAAGCAAGTGTCGCATGACCTAAATTCTACCCTTTTCAcgtttctttctttattcatcagCATGCTGCTGGTGTTCAAGTTCACaagaataaacaaaataaatctaCCACCATCCCCACCTAGATTGCCAATAATTGGCAATTACCTTCAACTAGGAACACTTCCTCATCGCTCTTTCCAATCCCTCTCACAAAAGTATGGTCCTCTAATACTGTTACATCTTGGTCAGCTTCGTGTGTTGGTGGTTTCCTCAGCAGATATGGCTAAGGAAATCATGCAAACACATGACACGGTTTTTGCGAGCCGACCATGTCTGACATCAACAAAAACCTTACTCTATGGATGTAAGGACATAGCATTTGCATGTTATGGTGATACTTGGAGACAGAAAAAGAAACTGTGTGTGATTGAATTGTTGAGTCAGAAAAGGGTTCAATCAGTACAGTTTATTAGAGAAGAGGAAGCTGTGGCATTGGTCGATAAAATCCGTCAAGCGACGATTTCGAGTGATGGTTGTTGCACTGTGAATCTTAGTGAGATGCTGCTTGGAACTGCAAACAGCATAATCAGTAGGTGTATATTTGGAAAGAAATATGATGGTGATGGTTGCAGATTCGGAGAGCTTGGCAGGAAGATAATGACTCAAGTTTCAGATTTTAGTATTGGAGATTTGTTTCCTTtgttgggttgggttgatgTTCTCACTggccaaattaaaaaatttaaggctACTTTTGAAGAAATGAATGATTTCTTTGATAGTGTAATTGTAGAGCATAAAATGTCTAGGAGGGACTCCAACAAGAAAGATTTCCTCGACATTCTGCTTCAACTTCAGAATGATGGTCTTTCAGAGTTCGACCTTACACAAAATGACTTAAAAGCACTCTTAATGGACATGTTTTTAGGAGGAAGTGACACAACTTCCACAACAGTAGAGTGGGCTATGGCAGAGCTCGCAAAAAACCCTGCCATAATGAAGAAAGCACAGGAGGAGGTAAGGAGAATCGTAGGCAATAAATCAAAAATAGAGGACAGTGATATTGATCAAATGGACTACTTGAAATGTGTAGTCAAAGAAACTTTGAGGATGCATCCAGCTGCTCCTCTTTTGGCTCCTAGAGAAACAACATCCAGTGTTAAACTCAGAGGGTATGATATTCCTGATAAAACTTTGGTATATGTCAATGCATGGGCAATTCAGAGGGACCCTGAATTTTGGGAAAGGCCAAAAGAGTTTCTACCTGAGAGATTTGAAAACAACAAGGTTAATTTCAATGGTCAATACTTTCAGTTTATCCCGTTTGGTTCTGGGAGAAGAAAATGCCCTGGTATGGCGTTTGGGCTTGCTTCAACCGAGTATATGGTTGCTAATCTTTTGTATTGGTTTGACTGGAAGATACCTACAAATGGTACATCTCTTCAAGACATAGACATGACTGAGAAATTTGGGATCACTGTCAACAAGAAAGTTCCTCTGTGTCTCCAACCAATACCATACAATAATTTCGTAGAATAA 1560 0.3769 MLEGKMFQYLPSFMKQVSHDLNSTLFTFLSLFISMLLVFKFTRINKINLPPSPPRLPIIGNYLQLGTLPHRSFQSLSQKYGPLILLHLGQLRVLVVSSADMAKEIMQTHDTVFASRPCLTSTKTLLYGCKDIAFACYGDTWRQKKKLCVIELLSQKRVQSVQFIREEEAVALVDKIRQATISSDGCCTVNLSEMLLGTANSIISRCIFGKKYDGDGCRFGELGRKIMTQVSDFSIGDLFPLLGWVDVLTGQIKKFKATFEEMNDFFDSVIVEHKMSRRDSNKKDFLDILLQLQNDGLSEFDLTQNDLKALLMDMFLGGSDTTSTTVEWAMAELAKNPAIMKKAQEEVRRIVGNKSKIEDSDIDQMDYLKCVVKETLRMHPAAPLLAPRETTSSVKLRGYDIPDKTLVYVNAWAIQRDPEFWERPKEFLPERFENNKVNFNGQYFQFIPFGSGRRKCPGMAFGLASTEYMVANLLYWFDWKIPTNGTSLQDIDMTEKFGITVNKKVPLCLQPIPYNNFVE 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g02324 519 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 18 514 - -
Tsu03g02324 519 SUPERFAMILY Cytochrome P450 50 513 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g02324 519 Pfam Cytochrome P450 50 497 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g02324 519 Gene3D Cytochrome P450 38 510 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g02324 519 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 449 458 IPR017972 GO:0005506|GO:0016705
Tsu03g02324 519 PRINTS P450 superfamily signature 317 334 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g02324 519 PRINTS P450 superfamily signature 370 381 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g02324 519 PRINTS P450 superfamily signature 447 456 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g02324 519 PRINTS E-class P450 group I signature 326 352 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g02324 519 PRINTS E-class P450 group I signature 198 216 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g02324 519 PRINTS E-class P450 group I signature 410 434 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g02324 519 PRINTS E-class P450 group I signature 77 96 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g02324 519 PRINTS E-class P450 group I signature 101 122 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g02324 519 PRINTS E-class P450 group I signature 306 323 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g02324 519 PRINTS E-class P450 group I signature 456 479 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g02324 519 PRINTS E-class P450 group I signature 446 456 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g02324 519 PRINTS E-class P450 group I signature 369 387 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g02324 519 PANTHER CYTOCHROME P450 71B11-RELATED 18 514 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g02324 Tsu-Chr3 26268690 26270687 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu03g02324 30 512 Cytochrome P450 AT5G25180 42.857 9.64e-142 416
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g02324 K20617 - gmx:100803922 600.512
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu04g02567 04 28935963 28938545 Tsu03g02324 03 26268690 26270687 PCT