Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g02244 ATGGAAGAAACATTTGTTCCCTTCCGCGGGATTAAGAATGACTTCAAAGCAAGAATTGTGTGCTACAAACAAGATTGGACCAGCGGAATCCGCGCAGGTGCAAGGATCCTTGCACCAACTACATACATATTTTTTGCTTCGGCAATTCCTGTTATTTCTTTTGGGGAGCAACTGGAGAGAAGTACAGATGGAACTCTCACTGCTGTTCAAACTCTTGCATCAACTGCACTATGTGGTATTATCCATTCAATTATTGGAGGTCAACCTCTCCTCATACTAGGTGTCGCTGAGCCAACAGTTCTGATGTATACATTCATGTACAATTTCGCAAAGGATCGCGAGGATTTAGGACACAAACTATTCCTGCCTTGGACTGGATGGGTATGCGTTTGGACTGCACTGTTGCTCTTCTTGCTGGCCGTTCTCGGTGCATGCTCCATAATCAACCGATTCACACGCCTTACTGGTGAACTATTTGGTCTGCTTATTGCAATGCTCTTTATGCAGCAGGCTATTAAGGGACTTGTGGAAGAGTTTGGTGTACCAAAGACGCAGACAGAAGGTACCAATCAGATTGCACTCCAACCCTCTTGGTTGTTTGGCAATGGAATGTTTGCTTTAGTTTTGTCGTTTGGCCTTCTTTTTACCGGTCTAGGAAGCCGCAAGGCTAGATCCTGGCGTTACGGGACAGGTTGGCTAAGAGGATTTATAGCTGATTATGGAGTTCCCTTAATGATTCTTGTATGGACTGCTGTGTCTTATATACCCGTCAACGAAGTCCCAAGGGGAGTTCCTAGGCGACTTTTCAGTCCAAATCCATGGTCTCCTGGTGCATACTCAAATTGGACTGTTGTCAAGGAAATGTTGAATGTGCCTCTAATGTACATTATTGGAGCATTTATACCAGCAACTATGATTGCAGTGCTTTACTACTTTGATCACAGTGTTGCATCACAACTTGCGCAGCAAAAGGAGTTCAATTTAAGAAAACCCTCatcttatcattacgatttgcTACTTCTGGGATTTTTGACGTTATTGTGTGGTCTTATTGGAATTCCTCCCTCCAATGGCGTGATTCCACAATCTCCAATGCATACCAAGAGCTTAGCTACTCTTAAACATCAGATTTTACGGCATAAGCTTGTCTCTACTGCACGGACTAGCATGGAGAAAAACATGAACCTGAGTCAGTTATACGAAAGTATGAAAGAAGCATACGATGTAATGCAGACACCATTGGTTCCCCAAATGCCACCCACATTGGGGCTGAAAGAGTTGAAGGAGTCTACCGTTGCACTGGCTTCAAGTCATGGATACATTGATGCTCCTGTTGATGAAATTGTCTTTGATGTGAACAAGGACGTTGATGACCTTTTGCCAGTTGAAGTTAAAGAGCAGCGCCTCAGCAATCTACTTCAGGCATCGATGGTTGCGGCTTGTGTTGCTGCTATGCCTCTTTTGAAGAAGATACCAACATCGGTGCTTTGGGGTTACTTTGCCTTCATGGCAATTGAAAGCTTGCCAGGAAATCAGTTTTGGGAGAGAATATTGTACCTTTTCACTGCTCCAAGTCGAAGATACAAACTGCTGGAGGAACACCATGCAACCTTTGTTGAGACTGTGCCTTTGAAAGCAATTGCTCTATTTACTCTGTTCCAGACAGCTTACTTGCTTCTCTGCTTTGGCATAACCTGGATACCAATCGCCGGGGTCCTATTCCCATTGTTAATCATGCTTCTTGTCCCGGTTCGACAATATTTTCTTCCCCATTTTTTCAAAGGAGCCCATCTTCAAGAGTTAGACGCAGCAGCATACGAGGAAGCACCTGCCATTGCTTTCAATATGTCTTTTGATGATCCGATTAATCATGCAAATATCAGTGGTGGCGAAATTCTTGATGAAATTATTACAAGGAGTCGTGGAGAGATACGTCGCACTCAAAGCTCAAAAACTTCAAGTTCAACTACAACACCAATAGGAGGAGATATAAGACCTTCGAATAGCCCGCAAGTATCAGAAACAATTCTCAGTCCTCGAGTAACTGCATTGAGAGGTGAAAGCAGCCTAGGATCAAACGGAAGAAGTTAA 2091 0.4333 MEETFVPFRGIKNDFKARIVCYKQDWTSGIRAGARILAPTTYIFFASAIPVISFGEQLERSTDGTLTAVQTLASTALCGIIHSIIGGQPLLILGVAEPTVLMYTFMYNFAKDREDLGHKLFLPWTGWVCVWTALLLFLLAVLGACSIINRFTRLTGELFGLLIAMLFMQQAIKGLVEEFGVPKTQTEGTNQIALQPSWLFGNGMFALVLSFGLLFTGLGSRKARSWRYGTGWLRGFIADYGVPLMILVWTAVSYIPVNEVPRGVPRRLFSPNPWSPGAYSNWTVVKEMLNVPLMYIIGAFIPATMIAVLYYFDHSVASQLAQQKEFNLRKPSSYHYDLLLLGFLTLLCGLIGIPPSNGVIPQSPMHTKSLATLKHQILRHKLVSTARTSMEKNMNLSQLYESMKEAYDVMQTPLVPQMPPTLGLKELKESTVALASSHGYIDAPVDEIVFDVNKDVDDLLPVEVKEQRLSNLLQASMVAACVAAMPLLKKIPTSVLWGYFAFMAIESLPGNQFWERILYLFTAPSRRYKLLEEHHATFVETVPLKAIALFTLFQTAYLLLCFGITWIPIAGVLFPLLIMLLVPVRQYFLPHFFKGAHLQELDAAAYEEAPAIAFNMSFDDPINHANISGGEILDEIITRSRGEIRRTQSSKTSSSTTTPIGGDIRPSNSPQVSETILSPRVTALRGESSLGSNGRS 696
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g02244 696 Pfam HCO3- transporter family 7 183 IPR011531 GO:0006820|GO:0016021
Tsu03g02244 696 Pfam HCO3- transporter family 462 552 IPR011531 GO:0006820|GO:0016021
Tsu03g02244 696 Pfam HCO3- transporter family 204 375 IPR011531 GO:0006820|GO:0016021
Tsu03g02244 696 PANTHER BORON TRANSPORTER 2-RELATED 1 689 - -
Tsu03g02244 696 Gene3D Helical hairpin bin 18 60 - -
Tsu03g02244 696 MobiDBLite consensus disorder prediction 647 678 - -
Tsu03g02244 696 MobiDBLite consensus disorder prediction 643 696 - -
Tsu03g02244 696 PANTHER ANION EXCHANGE PROTEIN 1 689 IPR003020 GO:0005452|GO:0006820|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g02244 Tsu-Chr3 24930909 24936117 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu03g02244 1 695 Antiporters AT3G62270 74.212 0.0 1043
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g02244 K24194 - gmx:100793554 1212.59
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu03g02244 03 24930909 24936117 Tsu03g02244 03 24930909 24936117 ECH