Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g02214 atGGAGGAAATTGTGCATCTAGGAATACCGTTTCTAACACAAACTCAATGGGAAGTGATAACTCCAACGTACGAAGATTTTGAGCTGATACGTTCTGAAGGTGCAAGATTGCATACAGTGATTAAAACTAATGAGGATGTGGAAGACGTATTTCTCGTTTTCGAGTATATTGACGTTAGTCTTAAAAGATACCTCGCTAGTCCGTTCCCTTTTGACGTCCAAAAACTGGTAAAACCTTTTCTACGACAAGCTCTTTCTGGATTGGCATACCTTCATGTGCAAGAAATTATACACAGAGATCTGAAACCGCATAATATTCTACTTTCATTTGAAAATCATGAGATCAGTGCAGTGAAGCTAGCTGACTTTGGTGTGGCAAAATTTATGGAACCTCCTCTTTCGCCATACTCTATTAGTATGGGTAATCCTTGTTATAAAGCACCTGAACTTTTGTTGGGATTTGCTAATTACTCAACTGCAATTGATATCTGGTCTCTGGGCTGCATATTTGCTGAGATGATTAAGCTCCAACCTCTGTTCATTGGTAAAGATGGACCGAAGATATTGACGGAGATATTTTGTTTTCTTGGCACTCCAACAGAAGAAACCTGGCCTGGTGTGTCTTCTATATGCCCTTTTATTAAAACATTTGACCCTCCAATAAAGCCGAAGGACCTAGCAGCTGAATTCCCTGAGCTCGAACCAGATGGTCTTGATCTTCTTTCGAAAATGCTTTGCCTATGTCCAAATAGTAGGATTTCAGCTGATGAAGCACTTGACCACCCATATCTTCGACCTTGA 801 0.402 MEEIVHLGIPFLTQTQWEVITPTYEDFELIRSEGARLHTVIKTNEDVEDVFLVFEYIDVSLKRYLASPFPFDVQKLVKPFLRQALSGLAYLHVQEIIHRDLKPHNILLSFENHEISAVKLADFGVAKFMEPPLSPYSISMGNPCYKAPELLLGFANYSTAIDIWSLGCIFAEMIKLQPLFIGKDGPKILTEIFCFLGTPTEETWPGVSSICPFIKTFDPPIKPKDLAAEFPELEPDGLDLLSKMLCLCPNSRISADEALDHPYLRP 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g02214 266 Pfam Protein kinase domain 39 264 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu03g02214 266 SUPERFAMILY Protein kinase-like (PK-like) 39 265 IPR011009 -
Tsu03g02214 266 SMART serkin_6 4 264 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu03g02214 266 ProSitePatterns Serine/Threonine protein kinases active-site signature. 96 108 IPR008271 GO:0004672|GO:0006468
Tsu03g02214 266 ProSiteProfiles Protein kinase domain profile. 1 264 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu03g02214 266 PANTHER CYCLIN-DEPENDENT KINASE 10 45 265 - -
Tsu03g02214 266 Gene3D Transferase(Phosphotransferase) domain 1 57 265 - -
Tsu03g02214 266 Gene3D Phosphorylase Kinase; domain 1 39 56 - -
Tsu03g02214 266 PANTHER CELL DIVISION PROTEIN KINASE 45 265 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g02214 Tsu-Chr3 24070524 24072654 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu03g02214 28 265 Core Cell Cycle Gene Families AT3G48750 42.917 4.35e-61 193
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-Pl Tsu03g02214 Pkinase 1.3e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g02214 K02206 - gmx:100804719 223.402