Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g02204 ATGGCTACTACTACCGGTGATGTTCTAAGACAGAGTTTACCTGAAGTGGGTGTTGATGGTGGTTTAGCAGAGTTACATGTTCTTGCTGttgatgatagttttgttgaTCGTAAAGTTATTGAAAGGTTACTCAAATTCACTTCTTGTAAAGtgaCTGTGGTAGAGAGTGGAACTAGAGCTTTACAGTATCTTGGATTGGATGGTGACACAAGTTCCATTGGTTTTGATGGTGTGAAGGTTAATATGATAATGACAGATTATTCCATGCCTGGGATGACAGGATATGAACTACTTAAGAAGATTAAGCAGGAATCATCTGTTTTTAGAGAGATTCCAGTGGTGGTTATGTCCTCTGAGAATATCTTAACCCGAATCGATAGTTGTTTGGAGGAAGGAGCAGAGGAGTTTCTATTGAAACCTGTCAAGTTATCCGACGTGAAACGCTTAACAGATTTCATCATGAGTGGTGAAGGGAAGAAAGTTGGAGGAAAAAGATCTCAAAAAAGAAGCCGATCAGATGATTGTATTTCTTCTCTATCAACTGCATGTTCGACTGTTTCTCATCCATGCGATCTATCATCACTATCACCGTCTGCAATGTCATCAAAGAAATCTAGACTATGA 624 0.3814 MATTTGDVLRQSLPEVGVDGGLAELHVLAVDDSFVDRKVIERLLKFTSCKVTVVESGTRALQYLGLDGDTSSIGFDGVKVNMIMTDYSMPGMTGYELLKKIKQESSVFREIPVVVMSSENILTRIDSCLEEGAEEFLLKPVKLSDVKRLTDFIMSGEGKKVGGKRSQKRSRSDDCISSLSTACSTVSHPCDLSSLSPSAMSSKKSRL 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g02204 207 MobiDBLite consensus disorder prediction 184 207 - -
Tsu03g02204 207 Pfam Response regulator receiver domain 27 147 IPR001789 GO:0000160
Tsu03g02204 207 PANTHER TWO-COMPONENT RESPONSE REGULATOR 20 207 IPR045279 GO:0009736
Tsu03g02204 207 CDD REC_typeA_ARR 27 149 - -
Tsu03g02204 207 Gene3D - 25 182 - -
Tsu03g02204 207 ProSiteProfiles Response regulatory domain profile. 26 154 IPR001789 GO:0000160
Tsu03g02204 207 SUPERFAMILY CheY-like 25 152 IPR011006 -
Tsu03g02204 207 PANTHER TWO-COMPONENT RESPONSE REGULATOR ARR3-LIKE PROTEIN 20 207 - -
Tsu03g02204 207 SMART REC_2 25 150 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g02204 Tsu-Chr3 23901138 23903731 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu03g02204 6 182 Response Regulator Gene Family AT3G48100 63.736 1.32e-74 221
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Tsu03g02204 Response_reg 3.3e-19 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g02204 K14492 - gmx:100819165 290.426
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu04g03616 04 45213244 45215367 Tsu03g02204 03 23901138 23903731 ECH
Tsu03g02204 03 23901138 23903731 Tsu03g02204 03 23901138 23903731 ECH