Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g02203 ATGTTAGCTACTATTGCAATAGCTGTGTTTGCCACAGCTCTTGCTATGTTACTCATTGCAGGGATTTTCCTTTACTTGTATCACAAATTTGTTCTTTCTAGATACCaaagaagaaacaaagttaCTTCTAATGGTTTTCTTCCTGAGATGAACCATTATGAAGATATAAAAAGATTTGGTGGTAATGTGAAAGGACTAATTGTTGAAGAAAATGGtgttgatgttatttatatGATGGATAAAGAAAGTAGACAAATGATCTCTAGATTTCCAAATTGTATGTTCAATCCTAgttttgaagaagatgaagaagaaaaagaaaagataatagATGTATTGGTTCATAGGTCTAAAGTATCTAATCCTCATGAGATTCCATTTGCATGTGATTCTCCACTTCCACTTCCACCACTACAAAAACCTTTACCAATGAATCTTGAGAAGAAGATTCATATGAGTTCTTACAATCAACCACTACCTTCTCCTCCTCTTTCTCCTCTTCCTCCTCCTTCTgcttctcctcctcctccacctcCACCTCCACCACCGCCACCAGCTCCTCTAAAGAAAGAAATTCCGAAGGCGCCAGTTCGTCCACCACTACCACCTGGTCCACCTCCACTTCCAAAGTCTAAAGGCTTTATTTCATCCATGAAACCACCAGCAGCACCTAAAGGAAAAGCAAATATGAAAGAGGGTATTATAGGAGAGAGTTCAGGAGATAAAGGTGGTGGACAAACCAGGCTAAAGCCTTTACATTGGGATAAGGTTGCAGCTGATGTTGATCATTCAACTGTTTGGGATCAGATCAATGATGGATCTTTTAGGTTTGATGATGAACTCATGGAATCGCTCTTTGGATATTCAACCACCTATCATAAAACTCAAGAAAGAAACAGGTCTCTTTCCAGTTTGTCCAAGTCCAATTCCAACACACAAACTCAAATATTCATACTTGAGCCAAGAAAATCTCAAAACACTGCAATTGTGCTGAGATCACTAGCAGTTTCTCGGCGCGAAATCTTGGATGCAGTACTTGATGGTCAAGGACTCAGTGTTGAGACACTTGAAAAACTCACTAAAATAGCTCCCTCTCAAGAAGAAGCATCCAAGATTGTCCAATTCATCGGCAACCCGAATAACCTTGCAGAAGCTGAGTCTTTCCTATACTACATCCTTAAAGCAGTTCCTACATCGTTCAACCATTTGAAAGCAATGCTTTTCAGATCAAATTACGATAGTGAGATTCTTCGGCTTAAGGAACACTTACAAACACTTGACTTGGGTTGCAAGGAACTGAAAACTAGTAGTCTATTCTTGAAACTCCTTGAGGCAATTCTCAAAACTGGTAACAGAATGAATGCTGGAACTTCAAGAGGTAATGCACAAGGTTTCAACTTAAGTGCTCTTACAAAACTTTCTGATGTAAAAAGCACAAATGGAAAAACTAGTTTACTTCACTTCATAGTTGAACAAGTAGTTCATTcagaaggaaaaagaaaagctATCTATGAAAAACACAATGATGAAAGTGAAAAAGAATATGTAATTCTTGGTTTACAAGTTCTGAGTGGTCTAAGTAATGAGTTATCAGAAGCAAAAAAAGCAGCTAACATGCACTATAACAGTTTCATCACTATGTGTTCAACTCTTAGTTCTCATGTTAATGAAATTAGACACATTATAACATGTTGTGGAAACACTAAAGGTGGATTTATCAATGAGATGAAAGGGTTTCTTGAGTTATGTGAGGATGAACTTAAAGTGGTGAAAGAGGAACAAACAAGGATCATGGAACTTGTGAAGAAAACGAATGAGTACTATCTAGCAGGAACATCTAAAGACAATATGTCTAATCcttttcatttgtttgttattgtAAAAGATTTTGTTGACAAGATAGGTCAAACTTGCATTGAACTAAAAAAGAAGGTAGAAAAGAAGAATGTAGGAGTGGAATCTGTATCAACAACACCACCTTTGTCTCCATCAAAGAAGGTGCCACTGAGATTTCGTAGcattgatttaaattttctGTCAAATAAGTTAGAGTTAGAGTCTACATTTTCCAGCCAGTCAGATGACTTCTGA 2091 0.3496 MLATIAIAVFATALAMLLIAGIFLYLYHKFVLSRYQRRNKVTSNGFLPEMNHYEDIKRFGGNVKGLIVEENGVDVIYMMDKESRQMISRFPNCMFNPSFEEDEEEKEKIIDVLVHRSKVSNPHEIPFACDSPLPLPPLQKPLPMNLEKKIHMSSYNQPLPSPPLSPLPPPSASPPPPPPPPPPPPAPLKKEIPKAPVRPPLPPGPPPLPKSKGFISSMKPPAAPKGKANMKEGIIGESSGDKGGGQTRLKPLHWDKVAADVDHSTVWDQINDGSFRFDDELMESLFGYSTTYHKTQERNRSLSSLSKSNSNTQTQIFILEPRKSQNTAIVLRSLAVSRREILDAVLDGQGLSVETLEKLTKIAPSQEEASKIVQFIGNPNNLAEAESFLYYILKAVPTSFNHLKAMLFRSNYDSEILRLKEHLQTLDLGCKELKTSSLFLKLLEAILKTGNRMNAGTSRGNAQGFNLSALTKLSDVKSTNGKTSLLHFIVEQVVHSEGKRKAIYEKHNDESEKEYVILGLQVLSGLSNELSEAKKAANMHYNSFITMCSTLSSHVNEIRHIITCCGNTKGGFINEMKGFLELCEDELKVVKEEQTRIMELVKKTNEYYLAGTSKDNMSNPFHLFVIVKDFVDKIGQTCIELKKKVEKKNVGVESVSTTPPLSPSKKVPLRFRSIDLNFLSNKLELESTFSSQSDDF 696
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g02203 696 Gene3D Formin, FH2 domain 262 653 IPR042201 -
Tsu03g02203 696 MobiDBLite consensus disorder prediction 159 210 - -
Tsu03g02203 696 ProSiteProfiles Formin homology-2 (FH2) domain profile. 239 660 IPR015425 -
Tsu03g02203 696 SUPERFAMILY Formin homology 2 domain (FH2 domain) 175 648 - -
Tsu03g02203 696 SMART it6_source 239 649 IPR015425 -
Tsu03g02203 696 PANTHER FORMIN-RELATED 5 689 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Tsu03g02203 696 PANTHER FORMIN-LIKE PROTEIN 5 689 - -
Tsu03g02203 696 MobiDBLite consensus disorder prediction 153 228 - -
Tsu03g02203 696 Pfam Formin Homology 2 Domain 246 632 IPR015425 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g02203 Tsu-Chr3 23895291 23898018 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu03g02203 4 682 FH2 protein (formin) Gene Family AT1G70140 39.973 1.68e-151 456
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g02203 - - gsj:114409782 749.584
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu03g02203 03 23895291 23898018 Tsu03g02203 03 23895291 23898018 ECH