Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g02172 AtggcagcaacaacaacaaatgaaGCAGAAGTGAAACCTATAAGATGTAAAGCGGCGGTTGCAAGAAGACCTGGTGAGCCATTGGTGATTGAAGAGATCTTTGTGGCACCACCAATGCCCCGCGAGGTTCGGATCCGTATTATATGTTCCTCTCTCTGCCATGTCGATCTCGCTTTTTCCAATATGCAGgatccTCCTGGCTTTTTCCCAAGAATTCTTGGCCATGAAGCAATTGGGGTTGTGGAAAGTGTAGGGAAGGATGTAACTGAAGTTACAAAAGGAGATACGGTTATTCCGATATTCCTACCAGATTGCGGGGAATGTACAGATTGCAAATCAACCAAGAGCAACCTTTGTACTAATTTCCCATTCAAAGTTTCTCCCTGGACGCTAAGAAATGAGAACACCAGATTCACTGACCTAAATGGAGAGTTCATATATCATTTCATGTCTATTTCAAGCTTCAGCGAGTACACTGTGGTTGACGTTGCCAATGTAACAAAGATTGACCCAGATATTCCTCCCGACAGGGCGTGCCTTCTCAGTTGTGGTATAGGAGCGGGGGTAGGTGCTGCTTGGAAAACAGCAGGTGTGGAGCCAGGGTCTACAGTAGCTATATTTGGACTAGGATCTATTGGATTAGCAGTTGCCGAGGGAGCCAGACTTTGTGGAGCAACTAAGATTATAGGTGTAGATGTCAACACCGAAAAATCTGAAGTTGGTAATGAActatttttcaataatatattgttGGCCACTCTCTCACTATGCGAGAATTCAGAATTTGATTTCatgtttttgttcttattttaa 813 0.4096 MAATTTNEAEVKPIRCKAAVARRPGEPLVIEEIFVAPPMPREVRIRIICSSLCHVDLAFSNMQDPPGFFPRILGHEAIGVVESVGKDVTEVTKGDTVIPIFLPDCGECTDCKSTKSNLCTNFPFKVSPWTLRNENTRFTDLNGEFIYHFMSISSFSEYTVVDVANVTKIDPDIPPDRACLLSCGIGAGVGAAWKTAGVEPGSTVAIFGLGSIGLAVAEGARLCGATKIIGVDVNTEKSEVGNELFFNNILLATLSLCENSEFDFMFLFLF 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g02172 270 Gene3D - 19 187 - -
Tsu03g02172 270 Gene3D - 188 244 - -
Tsu03g02172 270 Pfam Alcohol dehydrogenase GroES-like domain 41 168 IPR013154 -
Tsu03g02172 270 SUPERFAMILY GroES-like 11 191 IPR011032 -
Tsu03g02172 270 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 173 244 IPR036291 -
Tsu03g02172 270 PANTHER ALCOHOL DEHYDROGENASE 10 245 - -
Tsu03g02172 270 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 74 88 IPR002328 GO:0008270|GO:0016491
Tsu03g02172 270 PANTHER ALCOHOL DEHYDROGENASE-LIKE 7 10 245 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g02172 Tsu-Chr3 23265656 23270191 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu03g02172 42 183 Monolignol Biosynthesis Gene Families AT4G39330 25.175 7.56e-10 56.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g02172 K00121 - gmx:100817521 392.504