Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g02168 ATGGAGTTTCATGGCTTGGTTTTGCTATTTTGTTATGTTTGGTATCTCTTTTATGTGAGAAGATGCAGTGCTCAATTACAGTCCTCTCAGACACAAGTTCTTCTCCAATTACAAAAACACTTAGAATATCCAACACAATTAGAAATATGGAAAGATCATAAATCAGAACTTTGCTTTATCTCTTCAACACAAGTCAAAATTACATGCAAAGATAATTTTGTCACAGAGCTAACTATCGTTGGTGATAAGCCGAAAAATGGTAGAGATTTTGATGGTTTTGCTATTCCAAATCAAACACTATCACAAACCTTCTCAATGGACTCATTTGTTGCCACTCTAGCAAGGCTAACTAGCTTGAAAGTTCTTCATCTTGTTTCTTTGGGAATTTGGGGACCACTTCCAAATAGCATTCATAGACTCTTTTCACTTGAATATTTGGATTTGAGTTCAAATTTTCTTTATGGATCAATCCCTCCAAAAATCTCTACTATGGTTAACCTTAAAACTCTTATGTTAGGTGATAACTTCTTCAATGGTACTATCCCAAACTTGTTCAATTCATCAAATATTCTCACAGTTCttagtttgaaaaataataagttaaaGGGTCCATTTCCATTTTCAATCCTTAGTATCACAACCTTGACTATCATTGACATGTCAAGAAATCAAATATCAGGTAATTTGCAAGATTTTACTGGTTTGAGTATCTTGGAACAACTAGATTTAAGAGAAAATGACTTAGATTCCGATTTACCGGCTATGCCTAAAGAGTTGAAAATGCTTTTCCTCAACCGGAACTCCTTCTCAGGTCAAATTCCACAACACTATGGTCAACTAAATAAGCTTGAGCAGCTTGATATTTCCTTCAATGAACTCTCAGGAACTATTCCTTCTGAACTGTTTTCTTTGCCTAGCATCAGTTACTTGAATTTAGGATCCAACATTCTGAGTGGAACActtcaaaatgacataaaatgtGGCCATAATCTTAGTTTTGTTGATATATCAAACAATAAGTTAGATGGAGCCTTTCCTTCTTCTCTAAGTAATGTGTCAGAAAATAGAGTTGTTAAGAGTGATGGAAACTGTTTATCTGGGAGTTTGAAGCACCAGCATGCAGTATCTTTTTGCACAGAAGCTGATGGGAAGACGAAGTCACACCGAGTTGGTTTTTTGGTTGGTGTCATTGTTGGAATTCTTGTTATCATTGTGATTTTGGGTTTATGCATTGTTGTTACTTGTAAAAGGTATTACTCTAAGGGGATTTCAGAACAGCACCTATTGCATAAATCAGTTCAAGATAGCTTCTCAGCAGGATTCTCATCTGAGCTTATTGCAAACGCAAGGTATGTTTCTGAAGCTGCAAAGTTAGGCAGAGAAGATCTTCCCCCATGCCGATCATATTCATTCGAAGAGCTTAAGGAAGCAACAAATAACTTTGACAATTCTACTTTTCTTGGTGACAATATATATGGGAAGCTGTATAGAGGAAAATTGGAGAGTGGGATACCTGTTGTAATAAGGTGCATACCTTTGTCAAAAAAGTACTCAATTCGGAATTTCAAATTAAGGCTGGATTTGCTTGCAAAGCTCCGTCATGCACATTTGGTATCGCTCTTAGGTCATTGCATTGACGGCATTTTAGGAGAGCGTATCGACTCAAAAGTCTTTCTCATTTATGAATATGTGTCAAATGGGAGTTTCCAAACTTATCTCTCAGGAGATAGTTCTGGAAAGATTTTCAATTGGCCAGAAAGATTGTCAGTTTTAATCAGTGTTGCTAAGGCTGTTCACTTCTTACACACTGGAATGATACCTGGTTTCTTCAAAAATAgacttaagaccaacaatattTTGCTTAATGAAAATTGGATACCAAAGTTGAGTGACTATGGATTGTCCATTATCTCAGAAGAAACTGATGCAAGTGGGGTAAAAGGAGAAAGTCCCAATTCATGGCAAATGAAAAAGTTAGAGGATGATATTTATAGCTTTGGATTCATACTACTTGAGGCACTAGTTGGACCTTCAATGTCTACTAAAAAAGAAGCAACTGTGCTAAATGCAATGGCTTCCTTTAATAGTCAAGATGACTGGAAACAAATAGTGGAGCCAGTTGTGCAAGCTACTTGTTGCAAAGAATCTCTATCAATTGTGGTTTCTATAACAAACAAGTGCATTTCGACCGAGTCGTGGAGTCGACCATCTATCGAGGATGTCCTTTGGAACTTGCAGTATGCTTATCAGGTCCAGACAACAGCTGATGGGGATCACAGAATTTGA 2286 0.36 MEFHGLVLLFCYVWYLFYVRRCSAQLQSSQTQVLLQLQKHLEYPTQLEIWKDHKSELCFISSTQVKITCKDNFVTELTIVGDKPKNGRDFDGFAIPNQTLSQTFSMDSFVATLARLTSLKVLHLVSLGIWGPLPNSIHRLFSLEYLDLSSNFLYGSIPPKISTMVNLKTLMLGDNFFNGTIPNLFNSSNILTVLSLKNNKLKGPFPFSILSITTLTIIDMSRNQISGNLQDFTGLSILEQLDLRENDLDSDLPAMPKELKMLFLNRNSFSGQIPQHYGQLNKLEQLDISFNELSGTIPSELFSLPSISYLNLGSNILSGTLQNDIKCGHNLSFVDISNNKLDGAFPSSLSNVSENRVVKSDGNCLSGSLKHQHAVSFCTEADGKTKSHRVGFLVGVIVGILVIIVILGLCIVVTCKRYYSKGISEQHLLHKSVQDSFSAGFSSELIANARYVSEAAKLGREDLPPCRSYSFEELKEATNNFDNSTFLGDNIYGKLYRGKLESGIPVVIRCIPLSKKYSIRNFKLRLDLLAKLRHAHLVSLLGHCIDGILGERIDSKVFLIYEYVSNGSFQTYLSGDSSGKIFNWPERLSVLISVAKAVHFLHTGMIPGFFKNRLKTNNILLNENWIPKLSDYGLSIISEETDASGVKGESPNSWQMKKLEDDIYSFGFILLEALVGPSMSTKKEATVLNAMASFNSQDDWKQIVEPVVQATCCKESLSIVVSITNKCISTESWSRPSIEDVLWNLQYAYQVQTTADGDHRI 761
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g02168 761 PANTHER BNAA09G06560D PROTEIN 5 759 - -
Tsu03g02168 761 ProSiteProfiles Protein kinase domain profile. 481 750 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu03g02168 761 PANTHER OS07G0166700 PROTEIN 5 759 IPR045272 GO:0004714|GO:0006468
Tsu03g02168 761 Pfam Leucine rich repeat 258 315 IPR001611 GO:0005515
Tsu03g02168 761 Pfam Protein tyrosine and serine/threonine kinase 486 742 IPR001245 GO:0004672|GO:0006468
Tsu03g02168 761 Gene3D Ribonuclease Inhibitor 27 257 IPR032675 -
Tsu03g02168 761 Gene3D Ribonuclease Inhibitor 258 384 IPR032675 -
Tsu03g02168 761 Gene3D Phosphorylase Kinase; domain 1 446 563 - -
Tsu03g02168 761 SUPERFAMILY Protein kinase-like (PK-like) 464 745 IPR011009 -
Tsu03g02168 761 SUPERFAMILY L domain-like 114 372 - -
Tsu03g02168 761 Gene3D Transferase(Phosphotransferase) domain 1 564 759 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g02168 Tsu-Chr3 23208548 23212833 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu03g02168 6 693 Miscellaneous Gene Families AT5G14210 51.641 0.0 653
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-1 Tsu03g02168 PK_Tyr_Ser-Thr 2e-19 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g02168 - - gmx:100802978 1136.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu03g02168 03 23208548 23212833 Tsu03g02168 03 23208548 23212833 ECH