Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g02078 ATGGATTCACCAACTGATAAAGATATGGAAAAAAATAAGATGGATGAAGGAAACTTGTCACCATACAAAGTTGCAATTCCTCCAAAACAGAACTTATTCAAGGAATTCCAATACACTGTAAAAGAAACATTATTTGCTGATGATCCTCTAAGATCTTTTAAAGACCAAACTAAATCAAGAAAGTTACTTCTTGGTATTGAGTTCATATTCCCTATACTTAATTGGGGGAGAAGTTataatcttaaaaaatttaggggAGATATTATAGCTGGTCTAACTATTGCAAGTCTTTGCATACCTCagGATATTGGATACTCCAAGCTTGCACATTTGGCTCCACAGTATGGACTGTATTCAAGCTTTGTACCACCATTGATTTATGCTTTCATGGGTAGTTCTCGCGATATAGCAATAGGACCAGTAGCGGTGGTTTCTCTCTTGTTGGGGACGTTGCTTAGTAATGAGATTGATCCTGTTACACATGCAGCAGAATATCAAAGACTTGCTTTTACAGCCACTTTTTTTGCTGGGATTACACAAGCGACACTCGGGGTTTTCAGGTTAGGGTTCTTGATCGATTTCCTTTCCCATGCTGCTATTGTTGGTTTTATGGGGGGTGCTGCTATCACTATTGCCCTTCAACAGCTAAAAGGTTTTCTCGgcattaaaactaaaaatttcaccaCAAAAACAGATATTGTCAACGTGTTGCGTGCAGTATTCTCATCAGCCGAACATGGATGGAACTGGCAAACGATATTAATCGGAGCTAGCATTTTGAGTTTTCTTCTGGTTGCCAAATTTATTggaaagaagaacaagaaactcTTCTGGGTGCCAGCGATTGCGCCATTGATATCTGTTGTGTTGTCCactttttttgtattcataacACGCGCAGATAAGCAAGGAGTCGAAATTGTAAATCACATAGAGAAAGGAATCAATCCTTCATctgttcataaaatttattttaccgGTGACTACCTTGGGAAAGGTTTTAAAATCGGTGTCACGGCAGGCATGATAGCATTAACTGAAGCCATAGCTATTGGAAGAACATTTGCATCTATGAAGGATTATCAATTGGACGGAAACAGAGAAATGGTAGCACTAGGAACGATGAATGTCGTTGGTTCGATCACTTCCTGTTATGTGGCAACTGGTTCTTTCTCTCGGTCGGCGGTAAACTACATGGCTGGTTGCCAAACTGCAGTCTCCAATATTGTGATGTCAGTGGTTGTGTTTTTAACACTACAATTCATAACTCCTCTTTTTAAGTACACTCCAAATGCCATTCTCGCCTCCATCATCATTTCTGCTGTCATCAGCCTTGTGGACTATCAGGCAGCAATTTTGATTTGGAAGATCGATAAATTCGATTTTGTTGCGTGCATGGGAGCATTCTTTGGAGTTGTTTTCGTCTCAGTTGAGATAGGACTTCTAATTGCTGTTTCAATATCTTTTGCAAAGATCCTATTACAAGTGACAAGACCAAGAACAGCTATTTTGGGAAAGATTCCTAGGACAACTGTCTATAGAAACATCCAACAATACCCTGAAGCTAGTAAGGTTCCTGGTGTAATGATCGTAAGAGTTGATTCTGCAATATATTTTTCCAACTCCAACTATGTTAAAGAAAGGATATTAAGATGGCTAACAGATGAAGAAGCAGTGAAAGGAGACTACCATGCAAGAATTCAGTTTTTGATAGTTGAAATGTCACGTTAG 1731 0.3709 MDSPTDKDMEKNKMDEGNLSPYKVAIPPKQNLFKEFQYTVKETLFADDPLRSFKDQTKSRKLLLGIEFIFPILNWGRSYNLKKFRGDIIAGLTIASLCIPQDIGYSKLAHLAPQYGLYSSFVPPLIYAFMGSSRDIAIGPVAVVSLLLGTLLSNEIDPVTHAAEYQRLAFTATFFAGITQATLGVFRLGFLIDFLSHAAIVGFMGGAAITIALQQLKGFLGIKTKNFTTKTDIVNVLRAVFSSAEHGWNWQTILIGASILSFLLVAKFIGKKNKKLFWVPAIAPLISVVLSTFFVFITRADKQGVEIVNHIEKGINPSSVHKIYFTGDYLGKGFKIGVTAGMIALTEAIAIGRTFASMKDYQLDGNREMVALGTMNVVGSITSCYVATGSFSRSAVNYMAGCQTAVSNIVMSVVVFLTLQFITPLFKYTPNAILASIIISAVISLVDYQAAILIWKIDKFDFVACMGAFFGVVFVSVEIGLLIAVSISFAKILLQVTRPRTAILGKIPRTTVYRNIQQYPEASKVPGVMIVRVDSAIYFSNSNYVKERILRWLTDEEAVKGDYHARIQFLIVEMSR 576
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g02078 576 Pfam STAS domain 519 575 IPR002645 -
Tsu03g02078 576 PANTHER HIGH AFFINITY SULFATE TRANSPORTER TYPE 1 20 575 - -
Tsu03g02078 576 PANTHER SULFATE TRANSPORTER 20 575 IPR001902 GO:0015301|GO:0016020|GO:0055085
Tsu03g02078 576 MobiDBLite consensus disorder prediction 1 22 - -
Tsu03g02078 576 TIGRFAM sulP: sulfate permease 71 576 IPR001902 GO:0015301|GO:0016020|GO:0055085
Tsu03g02078 576 MobiDBLite consensus disorder prediction 1 17 - -
Tsu03g02078 576 ProSitePatterns SLC26A transporters signature. 113 134 IPR018045 GO:0008271|GO:0008272
Tsu03g02078 576 Gene3D STAS domain 498 576 IPR036513 -
Tsu03g02078 576 ProSiteProfiles STAS domain profile. 518 576 IPR002645 -
Tsu03g02078 576 Pfam Sulfate permease family 84 466 IPR011547 GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g02078 Tsu-Chr3 21924252 21929463 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu03g02078 4 575 Inorganic Solute Cotransporters AT1G22150 76.034 0.0 867
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g02078 K17470 - gmx:100804208 971.074
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu03g02078 03 21924252 21929463 Tsu03g02078 03 21924252 21929463 ECH
Tsu05g02096 05 25182754 25187141 Tsu03g02078 03 21924252 21929463 PCT