Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g02077 atgacTTCTTCATTTCCTTCTGATTCTTTCAATATGAGAGTCACAGAAGATGGAAATCTTCATCTTGAAGATACAGAGAGATCACAGTGGATAATAAACTCTCCAAATCCACCACCTCTTTGGAAAAAGCTTATTACTCCACTCAAGAATAATAAGCTTTTTTCTTCATCTAAGAAGAAAAGAACTTGCCATGAAAatgctttttctttctttagtaGTTTATTTCCAATCCTTGGTTTGTTAAAAAACTATGATGCTTTCAAATTTAAAGATGATATTCTAGCTGGTTTAACTCTTGCTAGCTTAAGCATACCTCAGAGTATAGGATATGCTAATTTAGCAAAACTTGATCCTCAATATGGATTATACACAAGTGTGGTTCCTCCTCTTATCTATGCTGTGATGGGGAGTTCAagagaaattgcaattggaccTGTAGCTGTAGTGTCACTTTTGCTATCAACTCTTTGTCACAACGTGGTTGATCCTGTGTTAAATCATGATGATTACAGAAATTTTGTCTTTACTGTAACATTATTTGCTGGAATCTTTCAAGTTGCATTTGGAGTTTTCAGGTTGGGATTTCTTGTGGATTTTCTGTCACATGCTGCACTTGTTGGATTCATGGCAGGTGCAGCTATCATGATTGGTCTTCAACAGCTTAAAGGGTTGCTTGGGATTAGTAATTTTACCACTAAATCTGATGTTGTTTCTGTTTTGGAATCTGTTTATAAATCACTTTGTCATCAAATTCCATCTGGAGAATGGTACCCTCTGAATTTTGTCATTGGAAGTTCATTCTTGATATTCCTTTTGATTGCAAGATTTATGgGCAAGAGAAACAAAAAGCTATTCTGGTTGCCAGCTATTGCTCCTCTTGTATCAGTTATATTATCAACTTTAATTGTGTATATATCCAAAGCTGATAAGAATGGGGTTAATATAGTAAAACATGTCAAAAGAGGCATTAATCCAATATCAATTCACCAATTACAACTCAATGGTGAACATGTTGGACAAGCTGCTAAAATTGGATTCATTTCTGCTGTTATTGCTCTCACAGAAGCAATGGCTGTTGGTAGATCTTTTGCTTCAATTAAAGGATACCATCTTGATGGAAACAAAGAAATGTTAGCAATGGGTTGTGGGAACATTGCAGGATCTTTCACTTCATGCTATGTTGCAACTGGTTCATTTTCAAGGACTGCAGTAAATTTCAGTGCAAGATGTCAATCATCAATATCAAACATTGTGATGGCAATGACAGTGATTCTGTGTTTGGAATTATTTACAAGGATGTTATATTACACACCTATGGCTATTCTTGCTTCTATAATCCTCTCTGCTCTTCCAGGATTAATTGATATTAGAGAAGCTTGTTATATATGGAAGGTTGACAAGTTTGACTTTCTTGCTTGCATTGGTGCTTTCTTTGGTGTCTTGTTTGTATCCGTAGAAATTGGTCTTCTTGTTGCTGTATCAATTTCGtttttaaagataataatacAATCAATTAGACCTGGAATTGAAGTTCTAGGTAGAATTCCAACAACACAAGCCTTTTGTGATGTTAGTCAATATCCCATGGCTACAAATACTCCAGGCATCTTGGTCCTTCGTATAAGCTCTGGCTCACTCTGCTTTGCAAATGCTAATGTTGTTAGAGAAAGAATACTCAAATGGGTCACTGAAGAAGATGGACTTAAAGAAACTACTAAGGGAAATGTCCAAGGAATAATATTGGACATGACTAATTTGATGAATGTTGATACTTCTGGAATTATAGTATTGGAGGAATTGCACAAGAGATTACTCTCTCGCGGCATAAAATTTGCTATGGTGAACCCAAGGTGGCTAGTAATTCACAAGCTTAAAGTGGCACATTTTGTAGATAAAATTGGGAAAGAATGGGTTTTCTTTACGGTTGCTGAAGCTGTGGATGCATGCTTATCTTCTAAATTTGCTAATCCatga 1974 0.347 MTSSFPSDSFNMRVTEDGNLHLEDTERSQWIINSPNPPPLWKKLITPLKNNKLFSSSKKKRTCHENAFSFFSSLFPILGLLKNYDAFKFKDDILAGLTLASLSIPQSIGYANLAKLDPQYGLYTSVVPPLIYAVMGSSREIAIGPVAVVSLLLSTLCHNVVDPVLNHDDYRNFVFTVTLFAGIFQVAFGVFRLGFLVDFLSHAALVGFMAGAAIMIGLQQLKGLLGISNFTTKSDVVSVLESVYKSLCHQIPSGEWYPLNFVIGSSFLIFLLIARFMGKRNKKLFWLPAIAPLVSVILSTLIVYISKADKNGVNIVKHVKRGINPISIHQLQLNGEHVGQAAKIGFISAVIALTEAMAVGRSFASIKGYHLDGNKEMLAMGCGNIAGSFTSCYVATGSFSRTAVNFSARCQSSISNIVMAMTVILCLELFTRMLYYTPMAILASIILSALPGLIDIREACYIWKVDKFDFLACIGAFFGVLFVSVEIGLLVAVSISFLKIIIQSIRPGIEVLGRIPTTQAFCDVSQYPMATNTPGILVLRISSGSLCFANANVVRERILKWVTEEDGLKETTKGNVQGIILDMTNLMNVDTSGIIVLEELHKRLLSRGIKFAMVNPRWLVIHKLKVAHFVDKIGKEWVFFTVAEAVDACLSSKFANP 657
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g02077 657 Pfam Sulfate permease family 89 474 IPR011547 GO:0016021
Tsu03g02077 657 Gene3D STAS domain 506 652 IPR036513 -
Tsu03g02077 657 TIGRFAM sulP: sulfate permease 76 645 IPR001902 GO:0015301|GO:0016020|GO:0055085
Tsu03g02077 657 CDD STAS_SulP_like_sulfate_transporter 527 642 - -
Tsu03g02077 657 ProSiteProfiles STAS domain profile. 543 649 IPR002645 -
Tsu03g02077 657 SUPERFAMILY SpoIIaa-like 532 649 IPR036513 -
Tsu03g02077 657 ProSitePatterns SLC26A transporters signature. 118 139 IPR018045 GO:0008271|GO:0008272
Tsu03g02077 657 PANTHER SULFATE TRANSPORTER 16 656 IPR001902 GO:0015301|GO:0016020|GO:0055085
Tsu03g02077 657 PANTHER SLC26A/SULP TRANSPORTER-RELATED 16 656 - -
Tsu03g02077 657 Pfam STAS domain 527 645 IPR002645 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g02077 Tsu-Chr3 21866340 21873166 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu03g02077 23 653 Inorganic Solute Cotransporters AT5G10180 61.189 0.0 792
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g02077 K17469 - gmx:100805269 1019.61
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g02099 05 25253075 25257772 Tsu03g02077 03 21866340 21873166 PCT