Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g02055 ATGTCTTTCACATTCAATTCATGTGTTCAACCGCCAACGGCAAAGATCGTACCACCAGAGCCTCCGGATGGAAGGAGACAtagtgacaaccatgcaaaagGAAAAGGTGTGAAGGAGATGATATCCTTCAGAGATAAGGTGATAGGCaatcaaatttcaattgaaagagaaaaaatggaTCTTTTAGCAACAAACAAAGCCAAGGTTGAGCTTGTTCAAGGTAATAGACTCATGCCTATGCTTCATGTTGAAAATTCTGTGATTGCTGAACTTAGTTTGCCATGGAAGGATGCTCTAGTTGTTAAATTATTGGGAAAATCCTTGGGTTACAACACCATGAAGGCTAAGCTTGAGTATGTGTGGAAACTTACGGGAGCCGTGAGTCAATGGACTCCAACATTCAACGCCGTTACTGCAAGGATAGACAAAACTATGGTTTGGATTCGTATACCGAGCTTAAATCTAGTTTATTATGATGAGAGCCTTCTTTGGGCGCTAGCTTCTATGGTTGGTACCCCTATCAAAGTCGATCTTCATACGTTGAAAGTGGCTCGGGGGAGATTTGCTAGAATGTGCGTTGAAATCGATCTCACAAAACCGGTGGTCGGGCGTGTCGGAATTAATGGAGATTGGTACCATGTGCAATACGAAGGACTCCATATCATATGGAAAAAGAATAATTCCGGCGAAAACAACGGCGACAAAACTGATACCGGAATCGGAGAAAAAATCATGGAAAATCAAAACGTAAATCAGGGAGTGAGTAATGATGAGAATCCTTCAAAATCGGCACAAGCCGTTGGAGAATTAACTCCTGATTTATTGCATGGGGAATGGATTAAAGTGGAGAGAaggaacaaaaacaagaaagttCCTATGCGTGGATTTAATGGGCAGCATGTTAATGGAAATAgtGATGAGAAGGCTCATGTGGAGCGGCCCATAGCAAAAGAAAATAGTGTTCAACATGACTTTGATCCCAAACAGCTTGAACACCATGAGATGCATCCCTCTATGTACAAGACACGTCACAATACGCACAACAATACAGCTGGAACATTCATTCATGGAGTGGAGCCAAACGACACGGTCAGTGAGAAAGATATAGAACCTTGGCTTCTTACTGTGATTTATGCTAGCCCTCGTGAGAATGAGAGACATGATACTTGGCAACTATTGCGACAACTTGCTACTTCAATTAACAAACCGTGGCTTATGATGGGGGATTTTAATGAAATTGCCTATCCAGATGAGAAGAAAGGAGGTGCCCCAgcaaatgttaaaaaatatcaaatttttaacaATTGGATTAATGATTGTAACCTCCTCGAAGTCACCACCGCAGGAACGCGCTTTACTTGGAGAGGTCCTAAGTGGAATGGAAGAGATAAAGTTTTCAAGAAACTAGACCGTGTTCTTTGTAATGTTGATTGGAGAATTAAATACCATGACGGGATTGCTAAGGTCCTTCCAAGGGTTCAATCTGATCATCATCCCATTATTGTGTTACTAGAGGGGCATGCCACTTCTAGTAGAAATCGGCCTTTTCGGTTTGAAGCAGCATGGAATTCTCatgttgattttaaatattttctgaaTTCCAACTGGGAGAAAGACACAAATATTGTTCAAAGTCTTCACAATCTTCCAATTCAACTCAAAAAGTGGAATAAAGATACTTTTGGtgatatatttaaaagaaagaagaagattttGGATAGACTTGATGGGATCCAAAATAGCTCTAACTATGGGCATAGCATTTTTCTTGAGAATTTGGAAAAAGAGCTACAAGATCAACTTGCGGTCACCCTTTATCAGGAAGAGTGCTTATGGTTTCAAAAATCTAGGAGTCAATGGATTAGTGATGGAGACCGGAATACAAAGTATTATCATTCCAAAACCATTGTTAGAATGAGACGTAACAAAATCATTTCTTTGCGCAAAGAGGATAGAACATGGGTGGATGAACCAGAAAGCCTGAAAGACTTAGTCCGAAATTTCTATATCAATCTTTTCAAAGAGGATAGAGAAGTTTGTGATTCGATTGTTTCTTGGACTACTTATCCAAATAATATggaaaaacatcaaaaaaatttaaatgatataaTCCAATTTGATGAATGCAAGAAAGCTCTTTTTGATATGGGGCCTCTGAAATCACCTGGTGAGGATGGTTACCCTGCTctcttttttcaacaaaattggGACACTGTTTCCGACTCTCTTTTTCATTATATTAACCAGGTTTGGCTTAATCCTTCTCTCATCTCTTCAATTAATAATACTTTACTTGTGTTAATTCCTAAAGTTGACAGACCTGAATTTGTTTCTCAATTCCGTCCTATAACTTTGTGTAATGCTGTCTACAAAATTATCACTAAGggaaaagaaacaaacaaagatGAATTTGGGGAAGGAGATGGTGAAGAAGGCGCCACAATCATCAAGATTGATAAACCAAGAGGAATCGCCACAATGCTAGCTATCTCTATAGgtagAAAAATCCACTTTTATCAATTGGATTTAGtgaaagataaaagaaaattaatggaTATATACGAGCCATTCCAGCAAGTTAGCATGTGGGGTGACAGCTTTAAAGTTGAAGGTGGTTTGAATTCAATTGCTTCACCAATGTTACTTGTCAACACTACTACTAGCATGGAGAACAAGtCTGAATATATTCCTCATGAACAAAGTGAGCCTTCTGAAGTTAATCAAGAGACTACAAATAAAGATGTTAGTAAGGTACTACGACGCCTTGCTCAAAATCGAGAGGCTGCTCGGAAAAGTCGATTGCGCAAAAAGGCTTATGTTCAACAATTAGAAACAAGTAGATTGAAGCTTATGCAATTGGAGCTAGAGATTGGAAGAGCAAGAAAACAGTTGCAGGGTATGTGCACTGGCAATGCATTAGATACCACTTTTATGGGATCACCTGAAACAATAAATCCagGGATTGTGGAATTTGAAGTTAAATATGGAAATTGGGTTGACGAGAACCATAGGCGGAACGAAGAGCTCAGAAATGTATTTCAAATTAACGCGTCCGAAGTGCAGCTCCATCAAGTTGTTCAGAGTGTATTGAGCAATTACTCGGATCTTTTCACAATGAAAGCGGACGCTGCAAAGGCCGATGTCCTCTATTTAATCTCCGGTGTGTGGAAACCGTCCGTAGAGCGCCTTTTCCTATGGATCGGAGGAGCTCGCCCCTCACAGCTTCTAAATcTCATTGTGCCGCAACTCGAGCCTTTGACCGAGCAACAAATGGCCAGCATTAAAAAGCTTCACCTATCGTCTCAGCAAGCTGAAGATGCTCTTTCACAAGGACTAGATAAACTTCAGCAGAGTTTGGTTCAAGACATGGCATTTGATCCATTCAGTGCAACAAATCATGGATTTCAGATGGCTATTGCTATAGGGAAATTCGAGGCACTTGAAGGTTTTGTAAGTCAGGCAGATCACCTTAGGAAGGAAACTCTGATACACATGTCACGAATCTTGTCTACACACCAAGCTGCTAGGGGTTTGATTGCTCTTGGGGAATACTTTCATCGTCTTCGTACTCTTGGTTCTCTTTGGACTTCACGTCCTTGTGACTCCGTGATATCGCCTAGGATTACTCCTTAG 3633 0.3826 MSFTFNSCVQPPTAKIVPPEPPDGRRHSDNHAKGKGVKEMISFRDKVIGNQISIEREKMDLLATNKAKVELVQGNRLMPMLHVENSVIAELSLPWKDALVVKLLGKSLGYNTMKAKLEYVWKLTGAVSQWTPTFNAVTARIDKTMVWIRIPSLNLVYYDESLLWALASMVGTPIKVDLHTLKVARGRFARMCVEIDLTKPVVGRVGINGDWYHVQYEGLHIIWKKNNSGENNGDKTDTGIGEKIMENQNVNQGVSNDENPSKSAQAVGELTPDLLHGEWIKVERRNKNKKVPMRGFNGQHVNGNSDEKAHVERPIAKENSVQHDFDPKQLEHHEMHPSMYKTRHNTHNNTAGTFIHGVEPNDTVSEKDIEPWLLTVIYASPRENERHDTWQLLRQLATSINKPWLMMGDFNEIAYPDEKKGGAPANVKKYQIFNNWINDCNLLEVTTAGTRFTWRGPKWNGRDKVFKKLDRVLCNVDWRIKYHDGIAKVLPRVQSDHHPIIVLLEGHATSSRNRPFRFEAAWNSHVDFKYFLNSNWEKDTNIVQSLHNLPIQLKKWNKDTFGDIFKRKKKILDRLDGIQNSSNYGHSIFLENLEKELQDQLAVTLYQEECLWFQKSRSQWISDGDRNTKYYHSKTIVRMRRNKIISLRKEDRTWVDEPESLKDLVRNFYINLFKEDREVCDSIVSWTTYPNNMEKHQKNLNDIIQFDECKKALFDMGPLKSPGEDGYPALFFQQNWDTVSDSLFHYINQVWLNPSLISSINNTLLVLIPKVDRPEFVSQFRPITLCNAVYKIITKGKETNKDEFGEGDGEEGATIIKIDKPRGIATMLAISIGRKIHFYQLDLVKDKRKLMDIYEPFQQVSMWGDSFKVEGGLNSIASPMLLVNTTTSMENKSEYIPHEQSEPSEVNQETTNKDVSKVLRRLAQNREAARKSRLRKKAYVQQLETSRLKLMQLELEIGRARKQLQGMCTGNALDTTFMGSPETINPGIVEFEVKYGNWVDENHRRNEELRNVFQINASEVQLHQVVQSVLSNYSDLFTMKADAAKADVLYLISGVWKPSVERLFLWIGGARPSQLLNLIVPQLEPLTEQQMASIKKLHLSSQQAEDALSQGLDKLQQSLVQDMAFDPFSATNHGFQMAIAIGKFEALEGFVSQADHLRKETLIHMSRILSTHQAARGLIALGEYFHRLRTLGSLWTSRPCDSVISPRITP 1210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g02055 1210 Pfam bZIP transcription factor 917 946 IPR004827 GO:0003700|GO:0006355
Tsu03g02055 1210 PANTHER FACTOR TGA7, PUTATIVE-RELATED 851 1202 - -
Tsu03g02055 1210 Pfam Seed dormancy control 1007 1080 IPR025422 GO:0006351|GO:0043565
Tsu03g02055 1210 SUPERFAMILY DNase I-like 370 504 IPR036691 -
Tsu03g02055 1210 CDD bZIP_HBP1b-like 917 963 - -
Tsu03g02055 1210 Gene3D - 916 969 - -
Tsu03g02055 1210 MobiDBLite consensus disorder prediction 1 33 - -
Tsu03g02055 1210 PANTHER TRANSCRIPTION FACTOR TGA9 851 1202 - -
Tsu03g02055 1210 SMART brlzneu 913 973 IPR004827 GO:0003700|GO:0006355
Tsu03g02055 1210 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 920 935 IPR004827 GO:0003700|GO:0006355
Tsu03g02055 1210 ProSiteProfiles DOG1 domain profile. 988 1198 IPR025422 GO:0006351|GO:0043565
Tsu03g02055 1210 Gene3D Endonuclease/exonuclease/phosphatase 321 504 IPR036691 -
Tsu03g02055 1210 SUPERFAMILY Leucine zipper domain 917 952 IPR046347 GO:0003700|GO:0006355
Tsu03g02055 1210 Coils Coil 936 963 - -
Tsu03g02055 1210 Pfam Domain of unknown function (DUF4283) 127 193 IPR025558 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g02055 Tsu-Chr3 21639628 21657226 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu03g02055 851 1199 Calmodulin-binding Proteins AT1G22070 51.081 8.99e-113 355
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Tsu03g02055 DOG1 6.2e-23 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g02055 K14431 - gmx:100794268 506.523
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g02128 05 26179362 26182566 Tsu03g02055 03 21639628 21657226 PCT