Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g02028 ATGATGCATCATCAAGCTTTTGATCAATCTCCGAGAATGTCAAGTGTTTCGGATGGGTTAAAGCTACACGGTCTGTCGTCATTGCCTCTGTCACCCGCCCTACTTTCATCGTCTAAAACAGAAAAAGGAGGGTTTAGCTGCAATTCAAACCGACAGGGAACATTTCGTTATGCCGTGCCTGTGCCACAGAGGAAACATTGGGGGATTCCACTTCCTGCGAAGCCAATTGCTTCACCACCACCGCCTCCTCCTCCGCTGCAGAGGAGGCATTGGGAAATGTCAGCAACCTCAGCGATTGTTGATCAGCCCCGATCTAGTTTGATGCCGCCGGAGTTATTACCTCCTTCGAGGCCTTTTGTGTTGCAAAACCAAAAAGCAATGGTGAACACATCAAACCAAAAACCCAAGGATGCTGCTCCATGGTCTGTTCTTCCCCTGCCAAATCAGGATGGAAGAGTACTAGATCTGAAAAAGTCTCAAAATATTGCAATCTCGCTCAAGGCTCTTAATGTCACAATAGAAGAAGTGTGTGAAGCACTTTTAGAAGGTAGTAGTGATACACTTGGTGCAGACCTACTTGAAAGCTTGTTAAAAATGGCACCACGCAAGGAAGAAGAGCATAAATTGAAGGAACATAAAGATGACTCACCAACTAAGCTTGATCTCGCTGAGAAATTTTTGAAGGCAGTGCTTGATATACCTTTCGCATTTAAAAGGGTTGAAGCAATGCTTTGCATGGTCAATTTTCAATCTGAAGTAGAGTATCTTAGAAAATCATTTCAAACTCTAGAGGCTGCCTGCGATGAACTGAGGAATTGTAGAATGTTCTTGAAGCTTCTAGAGGCTGTACTTAAAACTGGGAACCGCATGAATGTGGGAACAAATCGTGGTGATGCAGAGGCCTTCAAGCTCGATACACTTCTAAAATTGGCTGATGCGCAAAAGGCACAGATGGGAAACCACTCTACTTCATTTTGTCATACTGGAAATTATTAG 996 0.4398 MMHHQAFDQSPRMSSVSDGLKLHGLSSLPLSPALLSSSKTEKGGFSCNSNRQGTFRYAVPVPQRKHWGIPLPAKPIASPPPPPPPLQRRHWEMSATSAIVDQPRSSLMPPELLPPSRPFVLQNQKAMVNTSNQKPKDAAPWSVLPLPNQDGRVLDLKKSQNIAISLKALNVTIEEVCEALLEGSSDTLGADLLESLLKMAPRKEEEHKLKEHKDDSPTKLDLAEKFLKAVLDIPFAFKRVEAMLCMVNFQSEVEYLRKSFQTLEAACDELRNCRMFLKLLEAVLKTGNRMNVGTNRGDAEAFKLDTLLKLADAQKAQMGNHSTSFCHTGNY 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g02028 331 SMART it6_source 76 330 IPR015425 -
Tsu03g02028 331 Gene3D Formin, FH2 domain 118 328 IPR042201 -
Tsu03g02028 331 ProSiteProfiles Formin homology-2 (FH2) domain profile. 76 331 IPR015425 -
Tsu03g02028 331 SUPERFAMILY Formin homology 2 domain (FH2 domain) 152 324 - -
Tsu03g02028 331 PANTHER FORMIN-RELATED 128 314 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Tsu03g02028 331 Pfam Formin Homology 2 Domain 139 327 IPR015425 -
Tsu03g02028 331 PANTHER FORMIN-LIKE PROTEIN 1 128 314 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g02028 Tsu-Chr3 21055888 21057725 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu03g02028 82 316 FH2 protein (formin) Gene Family AT3G25500 65.690 1.78e-89 287
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g02028 - - gmx:100801837 337.421