Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g02025 ATGATTTTCGGTTATAACTACATAACTAACGCTATGGATTCTAAGAAGCTTCGAAGAAAACCTAAACTCGAGCGTCGTAATGCTCTTAAGTACTTCGATTACGATGCTGGatcgtcttcttcttcttcttcgtttgATGATTCTTCTGGTTCACTTTATACTCGTTCAATGGAATTGTATGATCGTACTAGCTTCCGTATTGAAGGAATTGAAGGTGAGTTAGATCGAATTTGTCAGAGTTTAGGACTTTCTGGACCTGAAGATTTTGCTATTCCTGCTGCTGCTTGGGAAGCTATGAAGTTTCGATCGAATTCGGATATTCTTCCTAGTTTGAAGATTGAGGAGATTAATAATCTTCAGCAgaaggaggaagaagatgaattgagTGAGAAATGTCAAGATATTGATAGGGATAGAGTTAAGGTTACAGATGAGGTTGCTGAGACTGTTGTTGTTGGTAGTGGTGGTGGTATTAATGGAATTCGTCCACCGATGATTAAGCCGCCACCGGGGATGAGAGTTCGGGTTGTTGATAACACGTGTTCAACTTGGGACCTTTTGAAGGAATTGGCTCCGGTAGTGGAAGGGGAAGAAGGGGTTTTCAACAGGGAAATGACGGAGAAAGAAAGCGAGGAAGTTGATAGGGTGAGTACCAAGAGAGAGGAGGAAGATGTGGCGGTGGATAATGTGGCAATGATTGATGAGATTTTGAAAGGGAGCCGTGATGCAATAGTTTTCAATTGTTTTTCAATGATTGGGGTTGACCTGTCTCTGAATCCAGCCATGGTTGGAGCTTTATTTCTCCAATTTACCCCACTCCTATTTTCATTTGAGTTGCTGcttcttttggatttttttttctgtataAGCTCAAGAACAAATCTTTTCTCAGTCGATGGAATCTTTTTTGCTGTAAAAGAAGTTTCACTGCTTGATCAAGGGGATCAGGGGAAACAAAGTGTCTATCAACTGGAGCAGGAAATTGCACTTTTGAGTCGTTTTGAACATGACAATATAGTTCAATACTATGGCACTGAAATGGATGAATCCAAGCTGTATATCTTTATTGAGCTTGTGACCAAAGGTTCTCTTAGAAACCTCTATCAGAGGTATACTCTCCGAGATTCCCAAGTATCTGCTTATACGAGACAAATTCTGCATGGTTTGAAGTATCTTCATGATCAAAATGTAGTTCACAGGGACATCAAATGTGCAAATATATTGGTGCACGCAAGTGGATCTGTCAAACTTGCAGATTTTGGTTTAGCAAAGGCAACCAAATTGAATGATGTTAAATCATGCAAGGGGACAGCATTCTGGATGGCCCCTGAGGTTTGCCTTCAATCTTAA 1350 0.3844 MIFGYNYITNAMDSKKLRRKPKLERRNALKYFDYDAGSSSSSSSFDDSSGSLYTRSMELYDRTSFRIEGIEGELDRICQSLGLSGPEDFAIPAAAWEAMKFRSNSDILPSLKIEEINNLQQKEEEDELSEKCQDIDRDRVKVTDEVAETVVVGSGGGINGIRPPMIKPPPGMRVRVVDNTCSTWDLLKELAPVVEGEEGVFNREMTEKESEEVDRVSTKREEEDVAVDNVAMIDEILKGSRDAIVFNCFSMIGVDLSLNPAMVGALFLQFTPLLFSFELLLLLDFFFCISSRTNLFSVDGIFFAVKEVSLLDQGDQGKQSVYQLEQEIALLSRFEHDNIVQYYGTEMDESKLYIFIELVTKGSLRNLYQRYTLRDSQVSAYTRQILHGLKYLHDQNVVHRDIKCANILVHASGSVKLADFGLAKATKLNDVKSCKGTAFWMAPEVCLQS 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g02025 449 Coils Coil 111 131 - -
Tsu03g02025 449 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 298 446 - -
Tsu03g02025 449 ProSiteProfiles Protein kinase domain profile. 230 449 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu03g02025 449 ProSitePatterns Serine/Threonine protein kinases active-site signature. 397 409 IPR008271 GO:0004672|GO:0006468
Tsu03g02025 449 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 14 119 - -
Tsu03g02025 449 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 143 217 - -
Tsu03g02025 449 SUPERFAMILY Protein kinase-like (PK-like) 298 448 IPR011009 -
Tsu03g02025 449 PANTHER SERINE/THREONINE/DUAL SPECIFICITY PROTEIN KINASE, CATALYTIC DOMAIN-CONTAINING PROTEIN-RELATED 14 119 - -
Tsu03g02025 449 Pfam Protein kinase domain 300 446 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu03g02025 449 PANTHER SERINE/THREONINE/DUAL SPECIFICITY PROTEIN KINASE, CATALYTIC DOMAIN-CONTAINING PROTEIN-RELATED 298 446 - -
Tsu03g02025 449 PANTHER SERINE/THREONINE/DUAL SPECIFICITY PROTEIN KINASE, CATALYTIC DOMAIN-CONTAINING PROTEIN-RELATED 143 217 - -
Tsu03g02025 449 SMART serkin_6 280 448 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu03g02025 449 Gene3D Transferase(Phosphotransferase) domain 1 294 449 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g02025 Tsu-Chr3 21027911 21035074 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu03g02025 22 445 MAP Kinase Kinase Kinase AT4G08500 42.510 2.04e-95 298
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Tsu03g02025 Pkinase 4.4e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g02025 K13414 - mtr:MTR_3g073250 569.311
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu03g02025 03 21027911 21035074 Tsu03g02025 03 21027911 21035074 ECH
Tsu05g02151 05 26797573 26802320 Tsu03g02025 03 21027911 21035074 PCT