Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g02022 ATGGCGGCTTCAGTAGATAACCGCATCTGGACAAGCCTTGAAAAAAGCACAGTTCATGCTTTCAGGTCAACTTCACAGGTCAAACATTTCTATAAATCATCACCTAAACCGCCATTACCATTCGATAAGAACTATTCTTCTTCCTCAAGCGACGAAGACGAAGAAGATGAGATTGAAACTGAGAATTTCAACAACAACCTCATTATGAAATCAAAAGAAACTGCAAAAGAATTACAACCATCGATCTTCGATCCACGCGATGAAGGAACCTCTGATCAATGGATTCCACGAAACACCTCACTGGTTCGTCTCACAGGCAAACATCCTTTCAACTCAGAACCACCACTCCAAGGACTAATGCAACATGGTTTCATAACTCCCGTCCCACTTCACTACGTTCGTAACCATGGGCCTGTTCCAAAAGCCCAATGGGATAATTGGACTGTTGAAGTAACAGGCCTAGTCAAAAGCCCAACCCAATTCACAATGGCCCAATTAATCAACGAATTTCCAAGCCGAGAATTCCCCGTTACTCTCGTTTGCGCCGGTAACCGTCGCAAGgaacaaaacatgataaaacaGAGCATTGGTTTCAATTGGGGTGCTTCCGCTATCTCCACTTCAGTGTGGCGCGGTGTACCGTTACGCACCGTACTCAAGCGGTGTGGAATTTATAACCGTAAACGTGGGGCCctttatgtttgttttgaaGGCGCTGAGGAACTGCCAGGTGGCGGTGGTTCAAAATATGGAACTAGTATCATGAGGGAAGTTGCACTAGATCCTTCCCGCGATATTATACTTGCGTATATGCAAAACGGTGACGTTTTGTCACCTGATCATGGTTTTCCAGTGAGAATTATAATACCGGGTTTTATTGGAGGGAGAATGGTGAAATGGTTGAAACGTATTATTGTTACACCTCAACAATCTGATAGTTATTATCATTACAATGATAATAGAGTTCTTCCTTCTCATGTTGATGCTGAACTTGCCAATGCTGaagCTTGGTGGTACAAGGCGGAGTATATTATCAATGAGCTAAATATAAACTCCGTCATAACGTCACCGTGTCACGATGAAATATTGCCGATCAATTCATACACTACTCAGATGCCTTATTTACTTAAAGGTTACGCATATTCCGGGGGTGGTAGAAAAGTGACACGTGTTGAAGTAACAATGGACGATGGTGAAACATGGCAGGTATGCACATTGGACCACTcagaaaaaccaaacaaatacgGTAAGTACTGGTGTTGGTGCTTTTGGTTCTTAGAAGTGGAAGTGTTGGACCTTCTTGGAGCCCATGAAATTGCTGTTCGAGCTTGGGATGAGTCCCTCAATACCCAACCTCAGAAACTCAATTGGAATCTCATgGGTATGATGAATAATTGTTGGTTCaaagtaaaatctaatttatgcAAAGCTCACAAGGGTGAAATTGGGATATTATTTGAGCACCCAACCCAACCAGGGAACCAATCAGGTGGTTGGATGGCAAAAGAAAAACAGTTGGAGAAATCATCAGAGTCTAACTCAATTCTAAAGAAGAGTCTCTCTTCACCTTTCATGATCACTGGTTCAAAAACCTACACACTCTCTgaagtaaaaaaacataataatgtTGATTCGGCATGGATCATTGTCCATGGCCACGTTTACGATTGCACACGCTTCATCAAAGATCACCCTGGCGGTGCAGATAGCATCCTCATCAACGCTGGCACCGATTGTACGGAGGAGTTCGAAGCCATCCATTCGGACAAAGCTAAGAAAATGATCGAGGAGTTTCGAATAGGTGAACTCATAACCACAGGTAGTCACAGCTCCAATTTGTCACCAAATAACTCAATGCACAACAATTCTGTTCCCTCTAATTTGGCCCCCATTAAGGAAATTACACTTACACCTATACTCAGCAATGTAGCTCTAAACACACGCGAGAAAATCCCGTGCAAGCTTCTCTTAAAAAAGACAATCTCTCATGATGTTAGGCTCTTTCGTTTTGCATTATCGAATGAGAAACAACTCTTGGGATTACCTGTGGGGAAACACATATTCTTATGTGCAACTATCAATGAGAAATTGTGTATGCGAGCTTACACACCAACAAGTGGTGTAGATGAAGTTGGATACTTTGATGTCTTGGTGAAAATTTACTTTAAAGGAGTGCACCCAAAAATCCCTAATGGTGGCCTAATGTCTCAATATCTAGACTCGTTGTCTATTGGTTCTGTTTTGGATATAAAAGGTCCATTGGGACACATAGAGTACACTGGTAAAGGCAATTTTCTTGTTCATGGAAAACACAAGTTTGCAAAGAGGTTAGCTATGTTGGCTGGTGGAACTGGGATAACGCCGATTTATCAAGTGGTTCAAGCGATTCTAAAAGATCCAGAGGATCTCACTGAAATGTATGTTGTGTATGCTAATAGAAGTGAGGATGATATATTGTTAAGAGAAGAGATGGATGAATGGGCTAAGAAGCATgaaaggttcaaggtatggtatGTTGTACAAGAAAGTAAAAGAGAAGGGTGGGAGTATAGTGTGGGGTTTATTAATGAAAGTATTTTGAAGCAACATGTTCCATGGGCTTCTCAAGATACTTTGGCGCTG 2622 0.4039 MAASVDNRIWTSLEKSTVHAFRSTSQVKHFYKSSPKPPLPFDKNYSSSSSDEDEEDEIETENFNNNLIMKSKETAKELQPSIFDPRDEGTSDQWIPRNTSLVRLTGKHPFNSEPPLQGLMQHGFITPVPLHYVRNHGPVPKAQWDNWTVEVTGLVKSPTQFTMAQLINEFPSREFPVTLVCAGNRRKEQNMIKQSIGFNWGASAISTSVWRGVPLRTVLKRCGIYNRKRGALYVCFEGAEELPGGGGSKYGTSIMREVALDPSRDIILAYMQNGDVLSPDHGFPVRIIIPGFIGGRMVKWLKRIIVTPQQSDSYYHYNDNRVLPSHVDAELANAEAWWYKAEYIINELNINSVITSPCHDEILPINSYTTQMPYLLKGYAYSGGGRKVTRVEVTMDDGETWQVCTLDHSEKPNKYGKYWCWCFWFLEVEVLDLLGAHEIAVRAWDESLNTQPQKLNWNLMGMMNNCWFKVKSNLCKAHKGEIGILFEHPTQPGNQSGGWMAKEKQLEKSSESNSILKKSLSSPFMITGSKTYTLSEVKKHNNVDSAWIIVHGHVYDCTRFIKDHPGGADSILINAGTDCTEEFEAIHSDKAKKMIEEFRIGELITTGSHSSNLSPNNSMHNNSVPSNLAPIKEITLTPILSNVALNTREKIPCKLLLKKTISHDVRLFRFALSNEKQLLGLPVGKHIFLCATINEKLCMRAYTPTSGVDEVGYFDVLVKIYFKGVHPKIPNGGLMSQYLDSLSIGSVLDIKGPLGHIEYTGKGNFLVHGKHKFAKRLAMLAGGTGITPIYQVVQAILKDPEDLTEMYVVYANRSEDDILLREEMDEWAKKHERFKVWYVVQESKREGWEYSVGFINESILKQHVPWASQDTLAL 874
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g02022 874 MobiDBLite consensus disorder prediction 29 63 - -
Tsu03g02022 874 PANTHER NADH-CYTOCHROME B5 REDUCTASE 62 874 IPR001834 GO:0016491
Tsu03g02022 874 SUPERFAMILY E set domains 347 471 IPR014756 -
Tsu03g02022 874 ProSiteProfiles Cytochrome b5 family, heme-binding domain profile. 529 604 IPR001199 -
Tsu03g02022 874 SMART Cyt_b5_2 532 604 IPR001199 -
Tsu03g02022 874 Gene3D - 347 522 - -
Tsu03g02022 874 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 747 872 IPR039261 -
Tsu03g02022 874 Pfam Oxidoreductase molybdopterin binding domain 136 315 IPR000572 -
Tsu03g02022 874 Gene3D - 86 337 IPR036374 -
Tsu03g02022 874 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 700 707 IPR001709 GO:0016491
Tsu03g02022 874 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 732 741 IPR001709 GO:0016491
Tsu03g02022 874 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 816 827 IPR001709 GO:0016491
Tsu03g02022 874 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 848 864 IPR001709 GO:0016491
Tsu03g02022 874 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 778 797 IPR001709 GO:0016491
Tsu03g02022 874 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 563 573 IPR001709 GO:0016491
Tsu03g02022 874 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 804 813 IPR001709 GO:0016491
Tsu03g02022 874 CDD eukary_NR_Moco 87 471 - -
Tsu03g02022 874 CDD cyt_b5_reduct_like 653 874 - -
Tsu03g02022 874 Pfam Oxidoreductase NAD-binding domain 779 871 IPR001433 GO:0016491
Tsu03g02022 874 PRINTS Cytochrome B5 signature 564 578 IPR001199 -
Tsu03g02022 874 PRINTS Cytochrome B5 signature 554 564 IPR001199 -
Tsu03g02022 874 PRINTS Cytochrome B5 signature 579 586 IPR001199 -
Tsu03g02022 874 PRINTS Cytochrome B5 signature 591 603 IPR001199 -
Tsu03g02022 874 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 648 760 IPR017927 GO:0016491
Tsu03g02022 874 Pfam Cytochrome b5-like Heme/Steroid binding domain 533 603 IPR001199 -
Tsu03g02022 874 PRINTS Eukaryotic molybdopterin domain signature 124 140 IPR008335 GO:0016491
Tsu03g02022 874 PRINTS Eukaryotic molybdopterin domain signature 455 468 IPR008335 GO:0016491
Tsu03g02022 874 PRINTS Eukaryotic molybdopterin domain signature 261 277 IPR008335 GO:0016491
Tsu03g02022 874 PRINTS Eukaryotic molybdopterin domain signature 294 307 IPR008335 GO:0016491
Tsu03g02022 874 PRINTS Eukaryotic molybdopterin domain signature 203 218 IPR008335 GO:0016491
Tsu03g02022 874 PRINTS Eukaryotic molybdopterin domain signature 442 454 IPR008335 GO:0016491
Tsu03g02022 874 PRINTS Eukaryotic molybdopterin domain signature 188 200 IPR008335 GO:0016491
Tsu03g02022 874 PRINTS Eukaryotic molybdopterin domain signature 345 357 IPR008335 GO:0016491
Tsu03g02022 874 PRINTS Eukaryotic molybdopterin domain signature 376 390 IPR008335 GO:0016491
Tsu03g02022 874 PRINTS Eukaryotic molybdopterin domain signature 278 291 IPR008335 GO:0016491
Tsu03g02022 874 PRINTS Eukaryotic molybdopterin domain signature 177 188 IPR008335 GO:0016491
Tsu03g02022 874 PRINTS Eukaryotic molybdopterin domain signature 390 402 IPR008335 GO:0016491
Tsu03g02022 874 PRINTS Eukaryotic molybdopterin domain signature 102 116 IPR008335 GO:0016491
Tsu03g02022 874 PRINTS Eukaryotic molybdopterin domain signature 417 427 IPR008335 GO:0016491
Tsu03g02022 874 Pfam Mo-co oxidoreductase dimerisation domain 343 471 IPR005066 GO:0016491|GO:0030151
Tsu03g02022 874 PANTHER NITRATE REDUCTASE 62 874 - -
Tsu03g02022 874 ProSitePatterns Cytochrome b5 family, heme-binding domain signature. 560 567 IPR018506 GO:0020037
Tsu03g02022 874 Pfam Oxidoreductase FAD-binding domain 653 759 IPR008333 -
Tsu03g02022 874 SUPERFAMILY Oxidoreductase molybdopterin-binding domain 84 345 IPR036374 -
Tsu03g02022 874 Gene3D Translation factors 640 754 - -
Tsu03g02022 874 Gene3D - 755 874 IPR039261 -
Tsu03g02022 874 SUPERFAMILY Cytochrome b5-like heme/steroid binding domain 527 605 IPR036400 -
Tsu03g02022 874 PRINTS Cytochrome B5 reductase signature 700 707 - -
Tsu03g02022 874 PRINTS Cytochrome B5 reductase signature 745 759 - -
Tsu03g02022 874 PRINTS Cytochrome B5 reductase signature 778 797 - -
Tsu03g02022 874 PRINTS Cytochrome B5 reductase signature 816 827 - -
Tsu03g02022 874 PRINTS Cytochrome B5 reductase signature 679 690 - -
Tsu03g02022 874 PIRSF Nitr_rd_NADH 10 874 IPR012137 GO:0006809|GO:0042128|GO:0050464
Tsu03g02022 874 Gene3D - 527 606 IPR036400 -
Tsu03g02022 874 SUPERFAMILY Riboflavin synthase domain-like 643 761 IPR017938 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g02022 Tsu-Chr3 20985833 20989025 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu03g02022 654 874 NADPH P450 reductases AT5G17770 35.426 1.83e-36 137
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g02022 K10534 - gmx:732634 1394.02