Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g02014 ATGGAGGAATTGCATAGAGCTCTGGAGAATCACTGCTTAGCAGTTTCCACTGTCCAAGGAAAGGGTCGTTCTCTTTTTACTTCTAGGGATTTCTACCCAGGGGAAGTGATTATTAGCCAAGAGGCATATGTTTGTGTTCCAACTCACAAAAGGTGTGATGGATGTTTTGCAACAACTAACCTTAGCAAGTGTTCACGTTGTCAAGTTGTTTGGTATTGTGGAATACCATGTCAGAAATCAGAGTGGAAGTTGCATCGTCTTGAATGTGAAGCACTCACAAGGCTAGACAACCTTAAGAGAAAATCTGTCACACCGTCGATACGGCTGATGCTTAAACTTTATATTCGAAGGAAGTTGCAAGATGAGAAGATCATTCCAACCACTGCTATGGACAACTACAAGTTAGTGGAGGCATTAGTGGCTCACATGTCTGACATCAAAGAGGAGCAGCTGGTGTTGTATGCACAGATGGCTAATCTTGTCCACTTAATACTACAATGGCCTGAAATCAATATAAAAGAGATTGCAGAAATTTTTTCCAAGTTTGCATGTAATGCACATACCATTTGTGACAGTGAGTTGAGACCTTTGGGAACAGGATTGTATCCTGTTGTTTCCATTATCAATCACAGCTGCTTGCCCAATTCAGTGTTGGTTTTTGAAGGAAGGGTAGCATCAGTACGTGCTTTGCAACATGTACCCAAAGGGACTGAGGTATTGATAAGTTATATAGAGACAGCTGGAAGCACCGTGACTCGACAAAAGGCTCTCAAAGAGCAGTACCTATTCACTTGTGTTTGTCCCCGCTGTTCTAAACTGggTCAGTATGAAGATGTTCGAGAAAATGCAATTCTAGAAGGATACAGATGCAAAACTGAAACATGTGATGGTTTCTTGCTCCGCACAACTGATGGAAAAGCATTTCAATGCCAAGAATGTGGGTTAGTTAGAGACAAGGAAGAGATAAAGCAAATTGCAACTGAAATAAAATTGCTATCAGAAGAAGCTTCTAAGCCTTCTTCCAGTGACAATTATCAAGATGCTATTTCCATATATAAAATGAATGAGAAACTGCAAACAAAACTATATCATCCTTTCTCAATCAATTTGATGCAAACACGAGAGACAATTTTGAAGTCACTAATGAAGCTGGAACATTGGAGGGAAGCTTTATCATATTGCAAATTGACCATACCAATCTATCAAAGAGTGTATCCAGCTGTTCACCCTCTGCTTGGATTGCAATATTATACTTGTGGAAAACTTGAATGGTATCTTGGAGACACAGAGGAAGCTGTTAGGTCATTGACCAAAGCTGTGGATATACTAAGGATTACTCATGGCACAAATACTCCTTTTGTTAAGGAACTCTTGATGATGTTGGAGGAAGCCCGTGCAGAAGCGTTGTACAAATTGTCCTCCAAAGAGGAGTAG 1434 0.4024 MEELHRALENHCLAVSTVQGKGRSLFTSRDFYPGEVIISQEAYVCVPTHKRCDGCFATTNLSKCSRCQVVWYCGIPCQKSEWKLHRLECEALTRLDNLKRKSVTPSIRLMLKLYIRRKLQDEKIIPTTAMDNYKLVEALVAHMSDIKEEQLVLYAQMANLVHLILQWPEINIKEIAEIFSKFACNAHTICDSELRPLGTGLYPVVSIINHSCLPNSVLVFEGRVASVRALQHVPKGTEVLISYIETAGSTVTRQKALKEQYLFTCVCPRCSKLGQYEDVRENAILEGYRCKTETCDGFLLRTTDGKAFQCQECGLVRDKEEIKQIATEIKLLSEEASKPSSSDNYQDAISIYKMNEKLQTKLYHPFSINLMQTRETILKSLMKLEHWREALSYCKLTIPIYQRVYPAVHPLLGLQYYTCGKLEWYLGDTEEAVRSLTKAVDILRITHGTNTPFVKELLMMLEEARAEALYKLSSKEE 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g02014 477 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SMYD 1 468 - -
Tsu03g02014 477 ProSiteProfiles SET domain profile. 11 244 IPR001214 GO:0005515
Tsu03g02014 477 Coils Coil 315 335 - -
Tsu03g02014 477 Pfam SET domain 22 243 IPR001214 GO:0005515
Tsu03g02014 477 Gene3D - 102 186 - -
Tsu03g02014 477 Gene3D SET domain 24 270 IPR046341 -
Tsu03g02014 477 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE ASHR1 1 468 - -
Tsu03g02014 477 SUPERFAMILY SET domain 9 243 IPR046341 -
Tsu03g02014 477 Gene3D - 51 101 - -
Tsu03g02014 477 Gene3D Tetratricopeptide repeat domain 397 474 IPR011990 GO:0005515
Tsu03g02014 477 SUPERFAMILY TPR-like 341 447 IPR011990 GO:0005515
Tsu03g02014 477 ProSiteProfiles Zinc finger MYND-type profile. 52 89 IPR002893 -
Tsu03g02014 477 SMART set_7 11 250 IPR001214 GO:0005515
Tsu03g02014 477 Pfam MYND finger 52 89 IPR002893 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Tsu03g02014 SET 2.7e-13 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g02014 K11426 - gmx:100789518 773.852
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu03g02014 03 20866474 20872572 Tsu03g02014 03 20866474 20872572 ECH