Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g02009 ATGATTGTGTCTCTTGTACAAAAGCTAATTAAGAAGCAACCCTTTCATCTGAACGACAACGACGGAACAACACAGCGGAGAAGATGCCGCCGCTTCATCACTTGTATGATCGCCGGCCGCTTTTTCTTGTCTTTCCTTCAACCATCAAACGCTCATTCACCTCTTTCAAAGGCTCCATCATCGGCCTCTTCACAGTTGTGTTTCagaattttgtttcttttgttccAGAATCGGGTTCATCTAGgctataattttaaaatgtctaCATATAGTGAAGCAACGTTGCATCTAGAAAGTGATACAGATGAAGTAGAAATTAATAGTGGTAATAGTGGGAATGGCATGTCTAGTCAGCAAGGGAAAGAAAACTCCAATGATTACAAATGTATCAGTGATTTGACAGATGATGATATAAGGGGTATGGAATTTAGCACAGAGAACGAAGCTACAACATTTTATGAATTGTATGCACATTTACATGGGTTTAATGTAAGGAAGGATAATGTGCAACGTGATTGTGAAAATAGGATTGTTATGCGTCAATTACTTTGCAATAAAGAGGGTACAAGTGACGGTTCTTCGAGGCCAACTATGCGAACTGGTTGTCAAGCGAAACTTCGACTACGTTATGATATTgttcataaaaaatttagagtttTTGTTTTCAACCCTACTCACAACCATGAACTAACTCCTGAACGTTTAGTTCATTTGATTCCTAAATATCGTAAATTGATTGAGGTAGATAAACAAGTTGTTGATGGCTTGCATTCCCAAGGCGTTAGAACTTGTCATATCGTGGGTTATTTGATGGGTCAAAAGGGTGGTGGTCATGAAGGTCTCGGGTTTATTAGAAAAGACCTATATAACTACACAGATCATCAAGCAAGAGTTAGAATAGCAGAAGGAGATACATATGCGACTTTGAGTTACTTCCAGGGTAAGGCTGACGATGATGCATCATTTTTTTCAGAGTTTAGTTTTACAGATGATGGACGCCTAGAAAACATCTTTTGGGCAGATGCTACCAGTAGGTTTGACTACGAGTGCTTCGGTGACGTTGTTGCTTTTGACGCGACTTATAGAAAGAACAGGTATGGCAAACCCCTTGTCATTTTTTCTAGATATAACCACCATGGAGAAACAACAATTTTTGCTGTTGCTTTAGTTTGTGATGAAACAATTAAGACCTACAAGTGggttttaaatatgttttcaaaggCCATGTATGGGAAACATCCAAAAGCAGTGATTACTGATGGTGATAAATCAATGAGAGAAGCCATTAGAGTTGTCTTTCCAAATACAAGGCACTGCCTTTGCGCATGA 1329 0.3717 MIVSLVQKLIKKQPFHLNDNDGTTQRRRCRRFITCMIAGRFFLSFLQPSNAHSPLSKAPSSASSQLCFRILFLLFQNRVHLGYNFKMSTYSEATLHLESDTDEVEINSGNSGNGMSSQQGKENSNDYKCISDLTDDDIRGMEFSTENEATTFYELYAHLHGFNVRKDNVQRDCENRIVMRQLLCNKEGTSDGSSRPTMRTGCQAKLRLRYDIVHKKFRVFVFNPTHNHELTPERLVHLIPKYRKLIEVDKQVVDGLHSQGVRTCHIVGYLMGQKGGGHEGLGFIRKDLYNYTDHQARVRIAEGDTYATLSYFQGKADDDASFFSEFSFTDDGRLENIFWADATSRFDYECFGDVVAFDATYRKNRYGKPLVIFSRYNHHGETTIFAVALVCDETIKTYKWVLNMFSKAMYGKHPKAVITDGDKSMREAIRVVFPNTRHCLCA 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g02009 442 MobiDBLite consensus disorder prediction 104 126 - -
Tsu03g02009 442 Pfam MULE transposase domain 354 441 IPR018289 -
Tsu03g02009 442 PANTHER OS02G0262500 PROTEIN 137 441 - -
Tsu03g02009 442 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 137 441 IPR031052 GO:0006355
Tsu03g02009 442 Pfam FAR1 DNA-binding domain 151 231 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g02009 Tsu-Chr3 20801191 20803379 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Tsu03g02009 MULE 2.1e-23 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g02009 - - ccaj:109792835 354.369