Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g01970 ATGTCTAGTGCCAAAAGTGATCAAAGATTAAAACTACTATTTACCAATGCTAAACCATACCTTTTAATGATTGGTCTTCAATTTGGTATGGCTGGTAATTATATCTTTGGCAAGGATATTCTTAATCATGGAATGAGCCGTTTTGTTTTCATCGTATATCGCAATGCCATGGCCGTTGTCGCTATTGCCCCCTTTGCACTCTTTTTTGAAAGgAAAAGTAGACCCAAGATGACACTCTCTATCTTCCTACAGATAATGGTGCTGGGATTTCTAGAGCCAGTTTTTAACCAAAGCTTCACTTACTTGGGGATGAAGTATACTTCGGCTTCATTTACATCTGCTATTATGAATGCTGTGCCTTCTATCACCTTTCTGATTGCTGTCATTGTCAGGTTGGAGCGTCTTAAATGCAAGGATATTAGAAGTCAAGCCAAAGTGTTTGGAACATTAGTAACCTTTGGTGGTGCTTTGCTAATGGCAATTTACAAAGGACCTgggtttaacattttccattcAGGAAACACCACCCAAAATCAAAATGGAAATCAAGAATCCTCTCATAATCACCAAATTACTGGAGCACTTTATATACTAATGGGTTGTGTGGCTTTATCTTGTTTCTACATTTTGCAGTCCGTAACCGTAAAAAGATACCCGGCGGAGCTATCATTGGCAACCTTGATATGTTTGGCGGGAGGAGCACAGGCAACTGCAGTGGCCCTTGTGGCCGAGCGTCACTCACACGCTTGGGCCATCGGTTTGGATTACAGGCTCTATGCTCCTCTTTACACGggAGTAGTAAGTTCAGGAATTGCATACTATGTTCAAGGGATAGTGATGCAAATGAGAGGACCTGTATTTGCAACAGCCTTTAATCCTCTTTGCATGATCATTGTTGCTTGTTTGGGCTCCTTTTTATTAGGAGAAAATCTCTATCTTGGAAGTATCATTGGAGCTGTTATCATAGCACTTGGCCTTTACACAGTTGTGTGGGGAAAAGCCAAAGATTATTCAGAATCAAACACCAAATTAACATCATCAGAGGATACAAAGTCACTTCCAATTACTTCAATGGATGATCCCAAAATTGATATTACTTCTGTCAATTTGGAAAATCAACCACCAACAAATGATAGATTAGAAGGTCTCAACAAATTGGAGAAAGAATCAGAGTTATATGTTACAACAGAAGTTTACTAG 1200 0.3875 MSSAKSDQRLKLLFTNAKPYLLMIGLQFGMAGNYIFGKDILNHGMSRFVFIVYRNAMAVVAIAPFALFFERKSRPKMTLSIFLQIMVLGFLEPVFNQSFTYLGMKYTSASFTSAIMNAVPSITFLIAVIVRLERLKCKDIRSQAKVFGTLVTFGGALLMAIYKGPGFNIFHSGNTTQNQNGNQESSHNHQITGALYILMGCVALSCFYILQSVTVKRYPAELSLATLICLAGGAQATAVALVAERHSHAWAIGLDYRLYAPLYTGVVSSGIAYYVQGIVMQMRGPVFATAFNPLCMIIVACLGSFLLGENLYLGSIIGAVIIALGLYTVVWGKAKDYSESNTKLTSSEDTKSLPITSMDDPKIDITSVNLENQPPTNDRLEGLNKLEKESELYVTTEVY 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g01970 399 PANTHER WAT1-RELATED PROTEIN 12 366 IPR030184 GO:0016021|GO:0022857
Tsu03g01970 399 Pfam EamA-like transporter family 192 330 IPR000620 GO:0016020|GO:0016021
Tsu03g01970 399 Pfam EamA-like transporter family 18 159 IPR000620 GO:0016020|GO:0016021
Tsu03g01970 399 PANTHER WAT1-RELATED PROTEIN 12 366 - -
Tsu03g01970 399 SUPERFAMILY Multidrug resistance efflux transporter EmrE 254 334 - -
Tsu03g01970 399 SUPERFAMILY Multidrug resistance efflux transporter EmrE 53 163 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g01970 Tsu-Chr3 20441351 20445971 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu03g01970 16 373 Nodulin-like Gene Family AT2G37460 47.368 2.40e-118 347
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g01970 - - mtr:MTR_3g072560 678.322
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu03g01970 03 20441351 20445971 Tsu03g01970 03 20441351 20445971 ECH