Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g01967 ATGGAGAAAATAGGTGTAACTAGTTTTAGCACTAAAATGAGTAAGGCAAGGCCTTATGTGTTAACGATTGGATTGCAATTTGGGTTTGCAGGAGCATACATATTCTCTATGGCTAGTTTTAACCTTGGAATGAATCGTTTTGTGTTCATTGTTTATCGTAATGTTATTGCTGCAATTGCCCTTGCTCCTTTTGCACTTATCTTTGAAAGGAAAATTAGGCCAAAGATGACGATCTCAGTCTTTTTGCGGATAATGGCACTTGCATTTTTGGAGCCAGTGATTGATCAAGGATTCACTTTCTTGGGAATGCAATATACATCAGCTTCATTTGCATCTGCTTTGATGAATGCTGTGCCTTCTGTTACCTTTGTGTTAGCCGTAATTTTCAGGATAGAGCGTGTAAATTTGAAGCAGATACGAAGCATAGCGAAGGTGATAGGGACGTTAGTAACATTTGCGGGGGCTTTAATGATGATACTTTATAAAGGACCACAAATCCATCTTTTTTATTCACCAAACGCAGCCCATCAAGCTAGTCAAAGCACACAAAATCTCAAACATTGGGTTTCAGGAACACTCTTTCTATTATTGGGTTGTGTTGCATGGTCATCTTTCTTCATTTTACAGTCGATAACATTGAAAAAGTATCCGGCCGAAATGTCACTTTCTACCTTAATATGCTTGATTGGTGCTTTGCAAAGTAGCGTGGTGGCATTGGTGGCGGAGCGTCACTCTGGTGCTGCGGTGTGGGCCATTGGTTGGGACTTTAGACTATACGGTCCACTTTACACGGGAATAATCACCTCAGGAATAACATATTATGTTCAAGGGTTAGTATTACAAAGCAGAGGCCCAGTATTTTTAACAGCATTTAATCCTCTTTGTATGATCATCACTTGTGCTTTGGGCTCCTTCCTTTTTGCAGAGCAACTCCACTTGGGCAGTATCATTGGAGCCGTGATTATTGCAGTCGGTCTTTATTCTGTGGTGTGGGGTAAAGGAAAAGACTATTCAGACACTTCTACGCCTGAATCATCAGTTACAACGAAGCAAATTGAGGCACAACAACTTCCAATTACTTCATCTAATCATGTTTAA 1098 0.4026 MEKIGVTSFSTKMSKARPYVLTIGLQFGFAGAYIFSMASFNLGMNRFVFIVYRNVIAAIALAPFALIFERKIRPKMTISVFLRIMALAFLEPVIDQGFTFLGMQYTSASFASALMNAVPSVTFVLAVIFRIERVNLKQIRSIAKVIGTLVTFAGALMMILYKGPQIHLFYSPNAAHQASQSTQNLKHWVSGTLFLLLGCVAWSSFFILQSITLKKYPAEMSLSTLICLIGALQSSVVALVAERHSGAAVWAIGWDFRLYGPLYTGIITSGITYYVQGLVLQSRGPVFLTAFNPLCMIITCALGSFLFAEQLHLGSIIGAVIIAVGLYSVVWGKGKDYSDTSTPESSVTTKQIEAQQLPITSSNHV 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g01967 365 SUPERFAMILY Multidrug resistance efflux transporter EmrE 250 334 - -
Tsu03g01967 365 PANTHER WAT1-RELATED PROTEIN 12 355 - -
Tsu03g01967 365 SUPERFAMILY Multidrug resistance efflux transporter EmrE 52 163 - -
Tsu03g01967 365 Pfam EamA-like transporter family 190 330 IPR000620 GO:0016020|GO:0016021
Tsu03g01967 365 Pfam EamA-like transporter family 20 159 IPR000620 GO:0016020|GO:0016021
Tsu03g01967 365 PANTHER WAT1-RELATED PROTEIN 12 355 IPR030184 GO:0016021|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g01967 Tsu-Chr3 20398059 20402906 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu03g01967 12 363 Nodulin-like Gene Family AT4G08300 50.562 1.86e-127 369
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g01967 - - gmx:100812537 552.747
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu03g01967 03 20398059 20402906 Tsu03g01967 03 20398059 20402906 ECH