Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g01964 ATGGGTGCTTGGTTACGAAATGCAAAGCCGTATCTACTACTCTTGGCTGTTCAATTTGGTTCTGCAGGTATGTTCATTTTTGCCATGGATGCTATCAACAAAGGAATGAGCCATTATGTGTTCATCGTCTACCGGAATGCCATAGCCGCCGTCACTTTAGCTCCTTTCGCATTTCATCTAGAAAGGAAAATTAGGCCAAAGATGAGTCTCCGTGTATTTTTCGAGATTATGGCACTTGCTTTCTTCGAAATAATACTTGATCAATGTTTTGCATTGTTGGGGATGAAATTAACGTCTGCGTCGTTCCTATCCGCTGTGATGAACTCTGCACCATCTGTTACTTTTGTGTTAGCAGTCATTCTAAAATTGGAGCACATGAAGATTAAGGAGGTAGCGTGTCAAGCGAAAATAATAGGCACTGTAGTAACCTTTGGAGGAACATTGTTAATGGCTCTGTACAAAGGTCCTGTTGTTAGTGTTGTGAGGTCATCCATTAGTCATGTTACCCGCCAGCCTGTGAATGACTCTGCCGGTGGTAACGATCGGTGGATAATAGGGACATGTTTCCTCCTCATTGGTTGCGCCGGATTTTCTGCCTTTTACATATTGCAGGCTATAACGTTGAGAAAGTATCCGGCACCAATGTCTTTGGCTACTTGGGTTTGTTTCGTTGGGGCAATTCAAAGCTTTGTGGTTGCATTTTTCGCTGAGCGACACAACTCTCATGCTTGGAATCTTGGTTGGGATACACGACTCTTTGCACCCGCTTATGCGGGGATAGTTACATCAGGAGTCCAATATTACATACAAGGTTTGGTCATCAAAAGTATGGGCCCTGTCATTGTAACTGCTTTCAACCCCGTGCGTATGATCATCGTAACTGCCTTGGCGTGCATCATCCTCTCCGAGCAACTCTTTCTTGGAAGTATTATTGGAGCAATTGTGGTGGTTCTTGGGCTTTATCTAGTTGTGTGGGGGAAATCTAAAGAACACAAAGCTAGGATTGATAACACATTGCAAGATCAACAACAGCTACCAGTGATAGATCCTACAAAAGAAAGTAGTGATAATAAAGCTCAATCGGTCATTAATGATGAACAAAAATGTCACGGTTGTGACCAAAATTAA 1128 0.4273 MGAWLRNAKPYLLLLAVQFGSAGMFIFAMDAINKGMSHYVFIVYRNAIAAVTLAPFAFHLERKIRPKMSLRVFFEIMALAFFEIILDQCFALLGMKLTSASFLSAVMNSAPSVTFVLAVILKLEHMKIKEVACQAKIIGTVVTFGGTLLMALYKGPVVSVVRSSISHVTRQPVNDSAGGNDRWIIGTCFLLIGCAGFSAFYILQAITLRKYPAPMSLATWVCFVGAIQSFVVAFFAERHNSHAWNLGWDTRLFAPAYAGIVTSGVQYYIQGLVIKSMGPVIVTAFNPVRMIIVTALACIILSEQLFLGSIIGAIVVVLGLYLVVWGKSKEHKARIDNTLQDQQQLPVIDPTKESSDNKAQSVINDEQKCHGCDQN 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g01964 375 SUPERFAMILY Multidrug resistance efflux transporter EmrE 220 330 - -
Tsu03g01964 375 SUPERFAMILY Multidrug resistance efflux transporter EmrE 44 154 - -
Tsu03g01964 375 Pfam EamA-like transporter family 9 150 IPR000620 GO:0016020|GO:0016021
Tsu03g01964 375 Pfam EamA-like transporter family 185 324 IPR000620 GO:0016020|GO:0016021
Tsu03g01964 375 PANTHER WAT1-RELATED PROTEIN 7 347 IPR030184 GO:0016021|GO:0022857
Tsu03g01964 375 PANTHER WAT1-RELATED PROTEIN 7 347 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g01964 Tsu-Chr3 20338366 20340442 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu03g01964 5 368 Nodulin-like Gene Family AT2G37460 42.350 1.09e-108 322
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g01964 - - gmx:100820569 548.51