Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g01940 ATGCCTCTACGCACGAGCCGGATTAGTCGTCCACCTTTGGTGGATCGGAAACCGAATTTGATCCGCAGGAAGATGAGGGAAATCATGATCAACCAGGCAACATCTTGTGTTCTGAAAGAGCTTGTGTGCAAGTTTATCCCTGAGATGTTTGGAAAGGAGATTGAGAAGGCCACATCTAGCATCTACTCTTTGCAGAATGTTTTCATTCGCAAAGTCAAGATCTTGAAGGCATGA 234 0.453 MPLRTSRISRPPLVDRKPNLIRRKMREIMINQATSCVLKELVCKFIPEMFGKEIEKATSSIYSLQNVFIRKVKILKA 77
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g01940 77 PANTHER 40S RIBOSOMAL PROTEIN S3A 20 77 - -
Tsu03g01940 77 PANTHER 40S RIBOSOMAL PROTEIN S3A 20 77 - -
Tsu03g01940 77 Pfam Ribosomal S3Ae family 18 76 IPR001593 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g01940 Tsu-Chr3 20085267 20086530 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu03g01940 21 77 Cytoplasmic Ribosomal Protein Gene Family AT4G34670 77.193 1.29e-24 90.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g01940 K02984 - zju:107412158 100.138