Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g01933 ATGGATTGTTGTGTGTGCACAACTATGCCATTGATATTAAGGCCACCAAGGAATACAATATGTGGGGCATGTTATGAAGGAGTTAGGAGCATGATCAACATGATGAATTGTCTTGAaagtgagaaagaaaaaacaatcagTAATCCAAACGGTTCTCCGGTTTCGACGCGAAATTCGAGTAAGTCACTTGATGATTGTATAAAATGGTGTTCAGAACAAATAGACCaatttaatcaacaaaaacaagatttgGCTTTTCTCAGAGGCTTTGTTGATGCCTTCAAAGAGCAGATTCATACAGATATCTTGATAAGTCCAGGCAATCATGGTCCACCTATACCTGCACATAAATCTGTTTTGGCTGCAAGATCAGAAATATTTAAGAACATGCTAGAGTGTGATGAATGTAAAGCTGCACCAACTTGTAACACAATAACAATACCTGATTTGAACCATGAAGAACTAGAATCTCTTCTAGAATTTCTCTATAGTGGGACATTACCTTTggaaaaattggagaaaaaTGTATATGCTTTGTCACAAGCAGCTGATAAGTACATTATTCCACACTTGATGAAATATTGTGAAAGATACTTATTCAACTCACTTAGCACTTCTAATGCATTTGAGACATTAGAAATTGCTGACATTTGTTCAAACAACAATTTGAAGGAGACAACTTTTAATTTCTTAGTTAAAAATATTGAGTATATGGTTTCTTCTCCTAAATTTGAAGCTTTTGTGCATAGGAGTCCACATTTAACTGTGCAATTAGTTTCAAGAGCATTTGTGAATGGTTCCAAATTAGTATCAAATTCTCTCTAA 825 0.3248 MDCCVCTTMPLILRPPRNTICGACYEGVRSMINMMNCLESEKEKTISNPNGSPVSTRNSSKSLDDCIKWCSEQIDQFNQQKQDLAFLRGFVDAFKEQIHTDILISPGNHGPPIPAHKSVLAARSEIFKNMLECDECKAAPTCNTITIPDLNHEELESLLEFLYSGTLPLEKLEKNVYALSQAADKYIIPHLMKYCERYLFNSLSTSNAFETLEIADICSNNNLKETTFNFLVKNIEYMVSSPKFEAFVHRSPHLTVQLVSRAFVNGSKLVSNSL 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g01933 274 ProSiteProfiles BTB domain profile. 100 171 IPR000210 GO:0005515
Tsu03g01933 274 Pfam BTB/POZ domain 94 201 IPR000210 GO:0005515
Tsu03g01933 274 SUPERFAMILY POZ domain 85 201 IPR011333 -
Tsu03g01933 274 SMART BTB_4 100 203 IPR000210 GO:0005515
Tsu03g01933 274 PANTHER BTB/POZ DOMAIN CONTAINING PROTEIN, EXPRESSED-RELATED 1 268 IPR044784 -
Tsu03g01933 274 Gene3D - 205 269 - -
Tsu03g01933 274 Gene3D Potassium Channel Kv1.1; Chain A 68 204 IPR011333 -
Tsu03g01933 274 PANTHER BTB/POZ DOMAIN CONTAINING PROTEIN, EXPRESSED 1 268 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Tsu03g01933 BTB 7.8e-22 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g01933 K10523 - gmx:100777561 462.996
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu03g01933 03 20018235 20020187 Tsu03g01933 03 20018235 20020187 ECH