Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g01929 ATGTCACCGTCTGCCGGAACCCACGTCCCCCTTCTAACCGGAACAAATTCGGCGGCGGAACCTGGTTCAGTTCCCGGTGCTGTATTCAATGTTGCAACAACAATAATTGGCGCCGGAATCATGTCAATCCCGGCGATTCTAAAAGTTCTCGGAGTATTTCCCTCTTTCGCCTTAATTCTGATCGTCGCCATACTAGCCGAAGTTTCCGTCGAATTTCTTTTGCGTTTTACACATGCCGGTGAAACGACGACTTACTCCGGTGTCATGAGGGAAGCTTTTGGGTCTTATGGAGCAATATCTGTTCAAGTTTGTGTCATAGTCACAAACTTTGGGGCTTTAATTCTCTATCTTATTATCATCGGGGATGTTCTATCTGGAAAGGAAAGTGGAAATGAAGTGCACTTGGGAATTCTGCAGCAGTGGTTTGGGATTCACTGGTGGAATTCAAGGGAAGTTGCTCTTCTCATCACCTTGGTTCTTGTTATGCTTCCATTAGTCTTGTACAAACGTGTAGAATCCTTGAAGTACAGTTCTGCAATATCAACTCTTCTCGCTGTGGCTTTTGTTGCCATTTGTTCTGGATTGGCTATTGTTGCTTTGGTGCAAGGAAAAACACAAACTCCTAAATTGGTTCCTCGATTAGACTACCAAACATCATTCTTTGATTTGTTCACTGCAGTTCCAGTTGTAGTCACAGCATTCACATTTCATTTCAATGTGCATCCAATTGGGTTTGAGCTTGCAAAGCCATCAGATATGAAAATCGCAGTTCGATTAGCAATAATGTTCTGTGCATTTATATACTTCACAATTGGTTTATTTGGCTACCTTTTATTTGGAGATTCAACACAGTCAGACATTCTAATCAATTTTGATCAGAGTTCTGATTCTACTGTTGGTTCGTTGTGCAATAGTATAATTCGGGTTAGCTATGCACTCCACATCATGCTAGTATTCCCTATTCTGAATTTCTCTTTGAGAGCCAACATTGATGAACTACTATTCCCTAAGAAGCCTCTACTAGCCACAGACAACAAGAGATTTGTAATTATCACTCTTGTGCTCTTAGTATTCTCCTATCTAGCTGCTATAGCAATCCCAGATATTTGGTACTTCTTTCAATTTCTAGGATCAACAACTGCATTATGCCTTGCCTTTATCTTCCCAGGCACTATTGCTTTAAGGGATGCTCTTGGCATATCAACAAGAAAGGACAAAATTATAGCACTGGTTATGATTATACTAGCTGTAGTGACAAGTGTAATTGCAATTTCcaccaacatatacaatgcttTAAGTAGCAAATCATAA 1311 0.3997 MSPSAGTHVPLLTGTNSAAEPGSVPGAVFNVATTIIGAGIMSIPAILKVLGVFPSFALILIVAILAEVSVEFLLRFTHAGETTTYSGVMREAFGSYGAISVQVCVIVTNFGALILYLIIIGDVLSGKESGNEVHLGILQQWFGIHWWNSREVALLITLVLVMLPLVLYKRVESLKYSSAISTLLAVAFVAICSGLAIVALVQGKTQTPKLVPRLDYQTSFFDLFTAVPVVVTAFTFHFNVHPIGFELAKPSDMKIAVRLAIMFCAFIYFTIGLFGYLLFGDSTQSDILINFDQSSDSTVGSLCNSIIRVSYALHIMLVFPILNFSLRANIDELLFPKKPLLATDNKRFVIITLVLLVFSYLAAIAIPDIWYFFQFLGSTTALCLAFIFPGTIALRDALGISTRKDKIIALVMIILAVVTSVIAISTNIYNALSSKS 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g01929 436 Pfam Transmembrane amino acid transporter protein 22 422 IPR013057 -
Tsu03g01929 436 PANTHER AMINO ACID TRANSPORTER, TRANSMEMBRANE DOMAIN-CONTAINING PROTEIN-RELATED 3 434 - -
Tsu03g01929 436 PANTHER AMINO ACID TRANSPORTER 3 434 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g01929 Tsu-Chr3 19964425 19966762 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu03g01929 1 430 Amino Acid or Auxin Permease AAAP Family AT3G56200 58.933 4.81e-179 505
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g01929 - - gmx:100815694 692.575
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu03g01929 03 19964425 19966762 Tsu03g01929 03 19964425 19966762 ECH
Tsu03g01929 03 19964425 19966762 Tsu05g03408 05 45375783 45379057 PCT
Tsu05g03409 05 45380893 45384412 Tsu03g01929 03 19964425 19966762 PCT