Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g01928 ATGTCACCGTCCGCCGGAATCCATCTCCCCCTATTACCTGAATCAAAATCAACGGCGGAGCATGGTACAATCCCCGGCGCTGTATTCAATGTCGCTACAAGCATAATTGGATCTGGAATCATGTCAATTCCAGCAATTCTAAAAGTTCTCGGTGTGTTTCCTTCTTTTGCATTGATTCTAATCGTGGCGGTGCTTGCCGAAGTTTCCGTTGATTTTCTGATGCGTTTTACGGATGCCGGTGCAAAAACGACTTATGCCGGTGTAATGAAAGAGGCTTTTGGATCGGTTGGAGCATTGACTACTAAAGTTTTTGTCATAATCAACAACTTTGGGGGATTAATTCTCTTACTTATTATTATAGGTAATGATTAA 372 0.422 MSPSAGIHLPLLPESKSTAEHGTIPGAVFNVATSIIGSGIMSIPAILKVLGVFPSFALILIVAVLAEVSVDFLMRFTDAGAKTTYAGVMKEAFGSVGALTTKVFVIINNFGGLILLLIIIGND 123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g01928 123 PANTHER AMINO ACID TRANSPORTER 3 122 - -
Tsu03g01928 123 PANTHER AMINO ACID TRANSPORTER, TRANSMEMBRANE DOMAIN-CONTAINING PROTEIN-RELATED 3 122 - -
Tsu03g01928 123 Pfam Transmembrane amino acid transporter protein 22 122 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g01928 Tsu-Chr3 19962214 19962585 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu03g01928 1 122 Amino Acid or Auxin Permease AAAP Family AT3G56200 49.593 1.22e-31 114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g01928 - - mtr:MTR_3g072105 162.155