LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Tsu03g01911	ATGGATACGACAACAAGAGGCAACGGAACCATCTCAGTTACTTATAATTCCCGGGGGAGGTGGGAAATTTGTGTTAAAAATGATAGAAATGTTGGTTCTTATGGCATTTTCTTAGGAGACAATCCATTCGATTTTGTGCTTCCTGCAACATTGTTCCAACTCATCATCATTGTCATACTCTCTCAAACGCTTTACTTTGTTCTCAGGCCATTACGAACACCAAAATTCATCTGCAGCGTTCTCGGTGGTGTTCTGTTAGGGCCAACATTTTTAGGGCGCAACATTGCATTAATGGAGACTCTATTTCCCTTGAAACAAGCTTCATTCTTAGCAACATTGTCAAAAATAGGAGCTGCATATTTTGTGTTCATCTATGCATTGAAATTAAATATAGCAACATCCTTAAAAGCAGCAAAACGTAGTTGGAGGTTTGGTGTAATTCCTTTCTTCTCTTCATATTTTGTTACAACAATTCTCTTAAGTTTGTATAGACCAAATGGTGTATTCGAAAAACCAGAAGCAATTACAGGATCAGTATATTCCATTCCAAATGTTTTCACTACTACAAGTTTTGCCGTTGTTTCCGAAGCTTTAACAGAACTTAACCTAATAAGCACTGAGTTAGGACAAATTGCTTTATCTTCAGCAATGATCACTGAAATAATGCAATGGATTACTATAACACTACGTTTCAATTCAGAAGGAAGTTTTGTCCTTTCACTTGAATTCATGACTTGTTCTGTTTTGTTCATTTTATCGTTCTTTTTCATCGTAAGACCGATGGCCAAGTTTATTATTCGGAGAACACCGGTTGGGAAACCGGTGAATGAAATGTATATTGTGATTATACTTTTAGGTGTTATAGTTATGTGTGCTCTTAGTGATGCACTTGGTTTATATTACATTATAGGACCTATTCTTTTTGGTGTGGTAATGCCTAATGGAGCTCCTTTGGCAACAACAATTATAGAGAAAATTGAACTAATCAACAAAGAATTTCTTATGCCAttcttttttctatatattgGTCTACACACAAATTTTGctgaaattagaaaaaattggAAGGTGGTTGTTACATTTCAAGGTATCTTATTTGTTGGATTCTTGACAAAGGTTCTTGCATGTGTCTTTATTTCTCCAACATATAATATGAGGCGTAAACATGGCTTGGTGCTTGGTCTTATAACAAGTATCAAAGGCATCATTGAACTAATCTTTTTTGCTAGACTCAGGGAACTCAAGGTTATTAATGATGAAGTATACAGCCAAATGGTTTTGTATGTGGTGATGATGACCGGTATATGCATACCCTTGATCAAAATCCTATATAAGCATCGATCTCGCGTGTCGATAGAAAAAAGCATACACAATGATCGAGTAAGAACGATTCAAAACAGTCCTGATAATTCAAAGTTCAACATTATTTCTTGCATACACAATGATGCAAATGTGCGTAGCATGATTGGTTTGTTAGAGGCATGTAACCCATCAAAAGAAAGCCCCTTATGTGTCCATGTCATTCATCTAATTGATTTATTAGGAAAATCCACACCAATTCTTCTTCCTATAAATATGCGAAATAGAAAAGCCTTGTCCATCAATAGTAACCATATTTTACGTGCTTTTGAGAATTactcacaaaattctaaaggtCCGGTCACAATTAATTCATATGTTAATGTTTCCCCATACATTAACATGCATGAAGCAATTTGTAACCTCGCCCACGACAAATTAGTTCATTTTCTCATTATTCCATTTCATGAAAATGATCAAAGTTTGTGTAGTGGTACTGTTGGATCTTCAATTCGTGACCTCAACGCTAATTTCCAAGCGTACGCACAATGTACAGTCGGGATATTGGTTGATAGATATTCGCGAATGAGTATGAGTACTACCAAACTGTTGTTTAATGTTGCTGTTTTCTTCGTCGGTGGACAAGATGATAGAGAAGCATTGGCATTGGGTATTCGAATGTTGGATCGTCCTAACACAAGCgtcacattattttttttcgCCATTGATAATTCAGGCGTTGTCGATTTTAAAGAGAATGAAGAAGAGGAAGCAATAGAGAGTATGTTAGATGAGAGTTTAATAGATGAGTTTAAggctaaaaaaattaatgttgacAATGTTGTTTGCCATGAGATTGTGGTGGATGATTGTGTACAAGTTTTAGAAGCCATTAGGGGTTTAGGGAATGAAGACTATGATCTAGTGATGGTAGGTAAGAGACACAATATTAGGGATATAACGGATGAAGAAATGTCAAATTTTTTGGATAATGCAAATTTGTTAGGGATTTTTGGAGATATGTTGGTATCTACTGAATTTTGTAATGGAGGTGTTCCTGTATTGGTGTTGCAATGTGGTGAGAAGAGAGTAAAACAGTGTGATAAGTTATCCCTTACttcattattttag	2430	0.3444	MDTTTRGNGTISVTYNSRGRWEICVKNDRNVGSYGIFLGDNPFDFVLPATLFQLIIIVILSQTLYFVLRPLRTPKFICSVLGGVLLGPTFLGRNIALMETLFPLKQASFLATLSKIGAAYFVFIYALKLNIATSLKAAKRSWRFGVIPFFSSYFVTTILLSLYRPNGVFEKPEAITGSVYSIPNVFTTTSFAVVSEALTELNLISTELGQIALSSAMITEIMQWITITLRFNSEGSFVLSLEFMTCSVLFILSFFFIVRPMAKFIIRRTPVGKPVNEMYIVIILLGVIVMCALSDALGLYYIIGPILFGVVMPNGAPLATTIIEKIELINKEFLMPFFFLYIGLHTNFAEIRKNWKVVVTFQGILFVGFLTKVLACVFISPTYNMRRKHGLVLGLITSIKGIIELIFFARLRELKVINDEVYSQMVLYVVMMTGICIPLIKILYKHRSRVSIEKSIHNDRVRTIQNSPDNSKFNIISCIHNDANVRSMIGLLEACNPSKESPLCVHVIHLIDLLGKSTPILLPINMRNRKALSINSNHILRAFENYSQNSKGPVTINSYVNVSPYINMHEAICNLAHDKLVHFLIIPFHENDQSLCSGTVGSSIRDLNANFQAYAQCTVGILVDRYSRMSMSTTKLLFNVAVFFVGGQDDREALALGIRMLDRPNTSVTLFFFAIDNSGVVDFKENEEEEAIESMLDESLIDEFKAKKINVDNVVCHEIVVDDCVQVLEAIRGLGNEDYDLVMVGKRHNIRDITDEEMSNFLDNANLLGIFGDMLVSTEFCNGGVPVLVLQCGEKRVKQCDKLSLTSLF	809

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Tsu03g01911	809	Gene3D	-	48	453	IPR038770	-
	Tsu03g01911	809	Pfam	Sodium/hydrogen exchanger family	55	435	IPR006153	GO:0006812\|GO:0015299\|GO:0016021\|GO:0055085
	Tsu03g01911	809	PANTHER	CATION/H+ EXCHANGER 3	5	796	-	-
	Tsu03g01911	809	PANTHER	CATION/H + ANTIPORTER	5	796	-	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Tsu03g01911	Tsu-Chr3	19806022	19815489	Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Tsu03g01911	35	791	Antiporter Super Family	AT2G13620	33.587	1.43e-137	426

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Tsu03g01911	-		-	mtr:MTR_3g071880	1122.84

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