Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g01911 ATGGATACGACAACAAGAGGCAACGGAACCATCTCAGTTACTTATAATTCCCGGGGGAGGTGGGAAATTTGTGTTAAAAATGATAGAAATGTTGGTTCTTATGGCATTTTCTTAGGAGACAATCCATTCGATTTTGTGCTTCCTGCAACATTGTTCCAACTCATCATCATTGTCATACTCTCTCAAACGCTTTACTTTGTTCTCAGGCCATTACGAACACCAAAATTCATCTGCAGCGTTCTCGGTGGTGTTCTGTTAGGGCCAACATTTTTAGGGCGCAACATTGCATTAATGGAGACTCTATTTCCCTTGAAACAAGCTTCATTCTTAGCAACATTGTCAAAAATAGGAGCTGCATATTTTGTGTTCATCTATGCATTGAAATTAAATATAGCAACATCCTTAAAAGCAGCAAAACGTAGTTGGAGGTTTGGTGTAATTCCTTTCTTCTCTTCATATTTTGTTACAACAATTCTCTTAAGTTTGTATAGACCAAATGGTGTATTCGAAAAACCAGAAGCAATTACAGGATCAGTATATTCCATTCCAAATGTTTTCACTACTACAAGTTTTGCCGTTGTTTCCGAAGCTTTAACAGAACTTAACCTAATAAGCACTGAGTTAGGACAAATTGCTTTATCTTCAGCAATGATCACTGAAATAATGCAATGGATTACTATAACACTACGTTTCAATTCAGAAGGAAGTTTTGTCCTTTCACTTGAATTCATGACTTGTTCTGTTTTGTTCATTTTATCGTTCTTTTTCATCGTAAGACCGATGGCCAAGTTTATTATTCGGAGAACACCGGTTGGGAAACCGGTGAATGAAATGTATATTGTGATTATACTTTTAGGTGTTATAGTTATGTGTGCTCTTAGTGATGCACTTGGTTTATATTACATTATAGGACCTATTCTTTTTGGTGTGGTAATGCCTAATGGAGCTCCTTTGGCAACAACAATTATAGAGAAAATTGAACTAATCAACAAAGAATTTCTTATGCCAttcttttttctatatattgGTCTACACACAAATTTTGctgaaattagaaaaaattggAAGGTGGTTGTTACATTTCAAGGTATCTTATTTGTTGGATTCTTGACAAAGGTTCTTGCATGTGTCTTTATTTCTCCAACATATAATATGAGGCGTAAACATGGCTTGGTGCTTGGTCTTATAACAAGTATCAAAGGCATCATTGAACTAATCTTTTTTGCTAGACTCAGGGAACTCAAGGTTATTAATGATGAAGTATACAGCCAAATGGTTTTGTATGTGGTGATGATGACCGGTATATGCATACCCTTGATCAAAATCCTATATAAGCATCGATCTCGCGTGTCGATAGAAAAAAGCATACACAATGATCGAGTAAGAACGATTCAAAACAGTCCTGATAATTCAAAGTTCAACATTATTTCTTGCATACACAATGATGCAAATGTGCGTAGCATGATTGGTTTGTTAGAGGCATGTAACCCATCAAAAGAAAGCCCCTTATGTGTCCATGTCATTCATCTAATTGATTTATTAGGAAAATCCACACCAATTCTTCTTCCTATAAATATGCGAAATAGAAAAGCCTTGTCCATCAATAGTAACCATATTTTACGTGCTTTTGAGAATTactcacaaaattctaaaggtCCGGTCACAATTAATTCATATGTTAATGTTTCCCCATACATTAACATGCATGAAGCAATTTGTAACCTCGCCCACGACAAATTAGTTCATTTTCTCATTATTCCATTTCATGAAAATGATCAAAGTTTGTGTAGTGGTACTGTTGGATCTTCAATTCGTGACCTCAACGCTAATTTCCAAGCGTACGCACAATGTACAGTCGGGATATTGGTTGATAGATATTCGCGAATGAGTATGAGTACTACCAAACTGTTGTTTAATGTTGCTGTTTTCTTCGTCGGTGGACAAGATGATAGAGAAGCATTGGCATTGGGTATTCGAATGTTGGATCGTCCTAACACAAGCgtcacattattttttttcgCCATTGATAATTCAGGCGTTGTCGATTTTAAAGAGAATGAAGAAGAGGAAGCAATAGAGAGTATGTTAGATGAGAGTTTAATAGATGAGTTTAAggctaaaaaaattaatgttgacAATGTTGTTTGCCATGAGATTGTGGTGGATGATTGTGTACAAGTTTTAGAAGCCATTAGGGGTTTAGGGAATGAAGACTATGATCTAGTGATGGTAGGTAAGAGACACAATATTAGGGATATAACGGATGAAGAAATGTCAAATTTTTTGGATAATGCAAATTTGTTAGGGATTTTTGGAGATATGTTGGTATCTACTGAATTTTGTAATGGAGGTGTTCCTGTATTGGTGTTGCAATGTGGTGAGAAGAGAGTAAAACAGTGTGATAAGTTATCCCTTACttcattattttag 2430 0.3444 MDTTTRGNGTISVTYNSRGRWEICVKNDRNVGSYGIFLGDNPFDFVLPATLFQLIIIVILSQTLYFVLRPLRTPKFICSVLGGVLLGPTFLGRNIALMETLFPLKQASFLATLSKIGAAYFVFIYALKLNIATSLKAAKRSWRFGVIPFFSSYFVTTILLSLYRPNGVFEKPEAITGSVYSIPNVFTTTSFAVVSEALTELNLISTELGQIALSSAMITEIMQWITITLRFNSEGSFVLSLEFMTCSVLFILSFFFIVRPMAKFIIRRTPVGKPVNEMYIVIILLGVIVMCALSDALGLYYIIGPILFGVVMPNGAPLATTIIEKIELINKEFLMPFFFLYIGLHTNFAEIRKNWKVVVTFQGILFVGFLTKVLACVFISPTYNMRRKHGLVLGLITSIKGIIELIFFARLRELKVINDEVYSQMVLYVVMMTGICIPLIKILYKHRSRVSIEKSIHNDRVRTIQNSPDNSKFNIISCIHNDANVRSMIGLLEACNPSKESPLCVHVIHLIDLLGKSTPILLPINMRNRKALSINSNHILRAFENYSQNSKGPVTINSYVNVSPYINMHEAICNLAHDKLVHFLIIPFHENDQSLCSGTVGSSIRDLNANFQAYAQCTVGILVDRYSRMSMSTTKLLFNVAVFFVGGQDDREALALGIRMLDRPNTSVTLFFFAIDNSGVVDFKENEEEEAIESMLDESLIDEFKAKKINVDNVVCHEIVVDDCVQVLEAIRGLGNEDYDLVMVGKRHNIRDITDEEMSNFLDNANLLGIFGDMLVSTEFCNGGVPVLVLQCGEKRVKQCDKLSLTSLF 809
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g01911 809 Gene3D - 48 453 IPR038770 -
Tsu03g01911 809 Pfam Sodium/hydrogen exchanger family 55 435 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Tsu03g01911 809 PANTHER CATION/H+ EXCHANGER 3 5 796 - -
Tsu03g01911 809 PANTHER CATION/H + ANTIPORTER 5 796 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g01911 Tsu-Chr3 19806022 19815489 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu03g01911 35 791 Antiporter Super Family AT2G13620 33.587 1.43e-137 426
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g01911 - - mtr:MTR_3g071880 1122.84