Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g01870 ATGAAGAAACCaccctcctcctcctcctccaacACCGCCGTCAcaaccaccatcatcatcatcatcatcttctatctttcatcttcttccaatgCTTTAGGCTCCGGCACCACCCTCTCCGTCACTGACTCTCCTGCCACTGTCTGCGGCATCACATCAGGCCAATCAAAACAAAGCATTCAGTGTTACCGTCAAGGGAAGATTTTTCCTATCCTTCCCAACGTTTCATTCTCGTCAATCTCCGGTGGAAGAACCTACTTCTGTGGTCTCAGGTCTGGTAACTATAGTTTACATTGTTGGGATAGTTCAAATTCGTTTCAAAGTAAAAGACTTTACGTTAATGATTCTGTTTTATTGGAGAATCTCTCTGTTGGAGATTCTCAAGTTTGTGCCACTGTGGTCGGAACCGGTACGGTTCGTTGTTGGAGAACTGATGAGGGTTTTGGACCATCTGGGTCGGACCGATTCGGTTCGATTTCATCTGGGTCGAACTTTTCTTGTGggattttgaaaaatggttcaCAAGTTAGGTGTTGGGGTGAGAAAGTTATTGCAGAAAGGTTACAGAATGAATTTGGGAACATTTCTATGTTGAGTATTGTAGCTGGTGGTTCACATGTTTGTGGTTTGAATTCAACTGGTTTTTTGGTTTGTAAAGGAAGTAATAGTTCTGGACAAATTGATGTTCCACAAGGTGGTGCTTTTGAGTATGGTGAATTAGCACTTGGTGATGAACATGGTTGTGCAATTAGAAGATTGAATGGTTCTGTTGTTTGTTGGGGTGGAAAAGGGAAATTTTctgttaattttattgaaaggGTTTCTTTTGAGTTGATTGTTTCTGCTTCCAATTTTACTTGTGGATTGACAACAACTAATTTTTCTGTTATTTGTTGGGGACCTGGTTGGTCTAatggttctgaatctgatgtTCCGTTGTCTCGAATTCTTCCGGGGCCTTGTGTTCAATCTTCTTGTAGTGAGTGTGGTTTATATCCTGATTCTCAATCATTGTGTTCTAGCACAAGTCATCACATTTGTAAGCCAAATATATGTAACACTACAAGCCCGCCACTGCAGCCTCCATCAGTTCAACCTCCTCCACCGCCGCCAGTGTCTCCTTCTCGATCGAAGACGTTGATGAGGGGATTATTGATTTTTGCAATTGTTGGATCAGTGGGAGGTTTTATTGGTATATGTGCAATAATCTATTGCTTATGGACAGGTGTTTGTTTTGGTAAAAAGAAAGTGCACAATTCTGTGCAACCAACGGTTACAAGAGGTAGTAGCAGTGGTTCAAATACTAGTTCGTCTTCGATTAAATCGGTGATTATGCGTCAAAGTTCGAGAATAATGAGGAGGCAGAGGAGTGGACCTTCGTCAACTAAGCATCAAGAAATGGCGGAGGAGTTTTCTCTGTCTGAGCTTATAGCAGCTACAAACCATTTTTCACTACAGAACAAAATTGGTGCTGGAAGCTTTGGTATTGTGTATATAGGTAAATTATTCGACGGTCGTGAAGTAGCAATCAAGAGAGGTGAAACAGGTACGaaaattaaaaagtttcaagAGAAAGAAAGTGCATTCGAGTCTGAATTAGCTTTTTTGTCGCGTTTACACCACAAACACTTGGTTAGACTAGTTGGTTATTGTGAGGAGAAAGATGAGCGGCTTTTGGTGTATGAGTACATGAAGAATGGTTCATTGCACAGTCATTTGCATGATAAGAACAATGTGGAAAAAAGTAGCAGTTTGTTGAATTCGTGGAATATGAGGATCAAAATCGCTTTGGATGCTTCAAGAGGAATAGAGTATCTGCATAATTATGCAGTTCCTTCAATAATTCATAGAGATATTAAGTCTTCAAATATTCTTCTTGATTCAACTTGGACAGCAAGAGTATCTGATTTTGGATTATCATTGATGAGTCCAGAATCTGATATCAATTACAAACCAACAAAAACAGCTGGAACAGTTGGTTATATCGATCCCGAGTACTATGGTTTAAATGTGTTAACAGCAAAGAGTGATGTATATGGACTTGGAGTTGTATTACTTGAATTGTTAACAGGAAAAAGAGCTATATTTCGAAACGATGAAGATGGAGGAAATCCATCTAGTCTAGTAGATTTTGCAGTGCCTGCTATTTTAGCTGGTGAGTTGATGAAAATTTTGGACACGAGAGTTGGACTTCCGGAGGCGGAGAGTAATGAATCGGAGGCAGTCGAGTTAATAGCGTATACTGCTGTGCATTGCGTGAATTTGGAAGGGAAAGATAGACCAACTATGGCTGATATTGTTGCCAATTTGGAGAGGGCATTGCTTATTTGTGAGGGTGGTAGTAACCATGAGATTGAAAGCATTTCGAGTGTTACTGTCTCTATTGTTTCAGATTGA 2397 0.3801 MKKPPSSSSSNTAVTTTIIIIIIFYLSSSSNALGSGTTLSVTDSPATVCGITSGQSKQSIQCYRQGKIFPILPNVSFSSISGGRTYFCGLRSGNYSLHCWDSSNSFQSKRLYVNDSVLLENLSVGDSQVCATVVGTGTVRCWRTDEGFGPSGSDRFGSISSGSNFSCGILKNGSQVRCWGEKVIAERLQNEFGNISMLSIVAGGSHVCGLNSTGFLVCKGSNSSGQIDVPQGGAFEYGELALGDEHGCAIRRLNGSVVCWGGKGKFSVNFIERVSFELIVSASNFTCGLTTTNFSVICWGPGWSNGSESDVPLSRILPGPCVQSSCSECGLYPDSQSLCSSTSHHICKPNICNTTSPPLQPPSVQPPPPPPVSPSRSKTLMRGLLIFAIVGSVGGFIGICAIIYCLWTGVCFGKKKVHNSVQPTVTRGSSSGSNTSSSSIKSVIMRQSSRIMRRQRSGPSSTKHQEMAEEFSLSELIAATNHFSLQNKIGAGSFGIVYIGKLFDGREVAIKRGETGTKIKKFQEKESAFESELAFLSRLHHKHLVRLVGYCEEKDERLLVYEYMKNGSLHSHLHDKNNVEKSSSLLNSWNMRIKIALDASRGIEYLHNYAVPSIIHRDIKSSNILLDSTWTARVSDFGLSLMSPESDINYKPTKTAGTVGYIDPEYYGLNVLTAKSDVYGLGVVLLELLTGKRAIFRNDEDGGNPSSLVDFAVPAILAGELMKILDTRVGLPEAESNESEAVELIAYTAVHCVNLEGKDRPTMADIVANLERALLICEGGSNHEIESISSVTVSIVSD 798
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g01870 798 PANTHER SERINE/THREONINE-PROTEIN KINASE-LIKE PROTEIN CCR4 10 785 IPR044815 GO:0004674
Tsu03g01870 798 Gene3D Transferase(Phosphotransferase) domain 1 564 782 - -
Tsu03g01870 798 Gene3D Phosphorylase Kinase; domain 1 443 563 - -
Tsu03g01870 798 SUPERFAMILY Protein kinase-like (PK-like) 459 770 IPR011009 -
Tsu03g01870 798 Gene3D - 152 347 IPR009091 -
Tsu03g01870 798 MobiDBLite consensus disorder prediction 423 465 - -
Tsu03g01870 798 ProSitePatterns Serine/Threonine protein kinases active-site signature. 614 626 IPR008271 GO:0004672|GO:0006468
Tsu03g01870 798 PANTHER SERINE/THREONINE-KINASE CCR4-LIKE PROTEIN 10 785 - -
Tsu03g01870 798 ProSiteProfiles Protein kinase domain profile. 483 775 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu03g01870 798 SMART serkin_6 483 774 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu03g01870 798 ProSitePatterns Protein kinases ATP-binding region signature. 489 511 IPR017441 GO:0005524
Tsu03g01870 798 SUPERFAMILY RCC1/BLIP-II 31 262 IPR009091 -
Tsu03g01870 798 Pfam Protein kinase domain 484 768 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g01870 Tsu-Chr3 19306222 19308946 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu03g01870 8 798 Receptor kinase-like Gene Family AT3G55950 58.162 0.0 828
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Tsu03g01870 Pkinase 9.1e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g01870 - - gmx:100786639 1077.77