Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g01854 ATGGATGATGCACATAAACATATCATGAGATCACAACTTTCTGGATGTTACACAACTAGTGTGTCTAATGGCAATGATATATGGCAAAGTGATAGCGTTCTACCATTTTTTCTTCCTAGATTTGCAGCTCAAATTGCTTTCATGTTGTTCACTAATCGTATTTTGTACTACATCCTTAGACCCTTCAATCAACCTCGTCTTGTTGCTGAGATTTTGACAGGTTTCTTGTTAAGTCCAGAAATACTTGGGACAACAAAAATTTTCTCAGAATTGGTCCCTCTAAAGATGGTGATAACAAGTGATACCATATCATATGTTGGACTAGTTTACTATGTATTCCTTGCTGGCTTAGACATCAACTTGGAAACTATCATAAGTGCAAGAAAAAAGGCTACAAGCATTGCTGTTGCAGGCATTATAATTCCAATGGTAATGGGGGGTGCAATATATGCTTTATCTCAAAGCATGTTAACAGCAAGTCCTGAATATTTGTCACAATACAATGCACCTAAAGcttatttattttggacattaaTCTTTAGTGTCACAGGTCTTCCAGTTGTTACTCAAATCCTAGCAGATTTGAAACTCCTCTATACTGGTTTAGGTAGAGTGGCTTTAACAGCAGCAATGATTAATGACTTCATCAATTGGATTATGTTTGCTTTGTTGGTTCCTTTTGAACATGAAGGAACGGTTGCTATCTACTCAATGTTAAGTACAATAGCATTTATCTTTGTATGTTTTGTCGTGATTCGGCCTTATCTCGTTAAGTTAATTGTTCGAAAAACAAAACGGAATGAATGGGACAATTATCAGTTGTTTTATGTTGTCATGGGTGCTTATGTTTGTGCAACTGTTACTGATCTTCTTGGAACACATCCTGTTATTGGGGCTTTAGTGTATGGAATAATGCTTCCGCGCGGTAAATTTACCAATATGTTGATAGAGAAGACAGAAGATTTTGGATCTGTTTATCTTGCTCCACTCTTCTTTGCTACCTGTGGTATGAGACTTCAGATATTTGCTGTCATTAAAACTCAAGGTTTAGTACTTGTGGCGATGGTTTTGTTCTTGTCATTTATCCCTAAGATTCTAAGCACTGTCGTAGCAACTCGATTCTTTGGTATGCCTGCTCTTGATGGTGTGGCTATTGGATTGCTTATGAACACCAAAGGCATCTTACCTCTAATAATGCTCAACATTGCCTGGGACAAAGAGaTTTTGAGTGTGGAGTCCTCATCAATTATGATGGTATCTGTTCTTCTAATGACAGTAGCAGTACCTCCTATAATTAATGCCGTATACAAACCGAGAAAGCTACACAAGCAAAACAAGCTAAGGACAATACAGAATTCAAAGGTTGAAGCAGAGCTAAGAGTTTTAGCTTGTGTTCACAACCCTCGTCATGCCACAGGATTCATCAACATTCTCGAAGCTTGTAATGCCATACAAATCTCTTCTTTACGCATATTTGCTCTTCAACTAGTTGAAATGACAGGAACGACAATATCCCTTTTAGCAGCACAAATCAACACACAAAGTATTTCAGAAGCCCTAACACAATCAGAAGAAGACTTAGAAAACATAACACTAACTTTCAAAGACTATGAAGAACAAAATAGAAACACTAGGGTTGAAACACTTGCTGCAGTTTCAACCTATTCAACTATTCACCAAGACATACACAGTGTAGCACAGGAAAAGCAAGCAACATTGATTCTCCTTCCTTTTCACAAACAATCAAATATTGAAAGTGTACTAGAAACAACAAACAAAGAGTTTCAAAATATAAACCAAAATGTGATGAGTGATGCCCCGTGTTCTGTTGGAATCTTCGTTGATCGCGGTCTCGGTTCgttattcaaaattaatttacgTATACTCATGCTTTTCATCGGTGGTCCTGATGATCGCGAAGCATTAGCTTTAGCATGGAGGATGTCGAAGCATGCATCGATTCAACTATCTGTTGTGAGACTTCTTTTGTTAGGACAAACTGCAGAAGTTGATTCATCACCAGAAGCAGAATCGAGAGGACTATTGTCTGCAGTGGTGGATTGTGAAAAGCAAAGAGAGCTCGATGATGAATATGTGAATACTTTTAGACTAAAAGCCATGCAGAGTAAGGAATCTACAACTTATTCAGACAAAGAAATTCATTCTCACGAAGACATTACTCGAGTGTTGAATGAGTTGGACAAAGTTGGATATGATTTGTATATTCTAGGACAAGGGACAGGTAGAAATTCTTTGGTGTTTTCAGAATTAATGAAAGGGACTGATTGTCCTGAACTTGGTGTTATAGGAGACATGGTGGTATCAAATAATTTTGGTTCATGTTCTTCATTACTTGTTGTACAACAATATGGGTTTGGCGGGATGGTTTTTGAGAATACCACTCATTCTCAACCTCCTGGTCAAGGGCCTAAAAATGaccatgatgatgatgatagtaaATCTAGGAATGTTTTTGTGAGGGTAGAATAA 2490 0.3687 MDDAHKHIMRSQLSGCYTTSVSNGNDIWQSDSVLPFFLPRFAAQIAFMLFTNRILYYILRPFNQPRLVAEILTGFLLSPEILGTTKIFSELVPLKMVITSDTISYVGLVYYVFLAGLDINLETIISARKKATSIAVAGIIIPMVMGGAIYALSQSMLTASPEYLSQYNAPKAYLFWTLIFSVTGLPVVTQILADLKLLYTGLGRVALTAAMINDFINWIMFALLVPFEHEGTVAIYSMLSTIAFIFVCFVVIRPYLVKLIVRKTKRNEWDNYQLFYVVMGAYVCATVTDLLGTHPVIGALVYGIMLPRGKFTNMLIEKTEDFGSVYLAPLFFATCGMRLQIFAVIKTQGLVLVAMVLFLSFIPKILSTVVATRFFGMPALDGVAIGLLMNTKGILPLIMLNIAWDKEILSVESSSIMMVSVLLMTVAVPPIINAVYKPRKLHKQNKLRTIQNSKVEAELRVLACVHNPRHATGFINILEACNAIQISSLRIFALQLVEMTGTTISLLAAQINTQSISEALTQSEEDLENITLTFKDYEEQNRNTRVETLAAVSTYSTIHQDIHSVAQEKQATLILLPFHKQSNIESVLETTNKEFQNINQNVMSDAPCSVGIFVDRGLGSLFKINLRILMLFIGGPDDREALALAWRMSKHASIQLSVVRLLLLGQTAEVDSSPEAESRGLLSAVVDCEKQRELDDEYVNTFRLKAMQSKESTTYSDKEIHSHEDITRVLNELDKVGYDLYILGQGTGRNSLVFSELMKGTDCPELGVIGDMVVSNNFGSCSSLLVVQQYGFGGMVFENTTHSQPPGQGPKNDHDDDDSKSRNVFVRVE 829
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g01854 829 MobiDBLite consensus disorder prediction 798 829 - -
Tsu03g01854 829 MobiDBLite consensus disorder prediction 809 829 - -
Tsu03g01854 829 Gene3D - 40 446 IPR038770 -
Tsu03g01854 829 PANTHER CATION/H+ EXCHANGER 3 24 806 - -
Tsu03g01854 829 Coils Coil 520 547 - -
Tsu03g01854 829 PANTHER CATION/H + ANTIPORTER 24 806 - -
Tsu03g01854 829 Pfam Sodium/hydrogen exchanger family 49 431 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g01854 Tsu-Chr3 19093754 19096873 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu03g01854 16 790 Antiporter Super Family AT2G13620 37.834 0.0 549
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g01854 - - gmx:100802381 1087.4