Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g01845 ATGGcttattttctcttcttcatcatcttcgtTATCTTTCTCTTCCTTCTCAGAAAACTCCGTTATTCGACACTCCGGCTACCGCCGGGGAGTCTCGGTTTACCGTTCATCGGAGAAACGTTACAGATGATATCAGCATACAAGAGTGACAATCCTGAACCTTTCATCGACCAACGAGTGAACCGATACGGTTCAATTTTCACTAGTCATGTTTTTGGTGAACCGACTGTTTTCTCGGCTGACCCGGAAACGAACCGGTTTATTCTTATGAATGAGAAACTTTTTGAATGTAGTTACCCCGGTTCAATATCGAACCTTCTTGGAAAACACTCGTTGCTTCTATTAAAGGGTTCGATTCACAAGAAAATGCATTCTCTTACTATGAGTTTCGCTAATTCTACCATTATTAAGGATCATCTTCTCTTTGATATAGACCGGCTTATTCGGCTCAATATGGATTCTTGGTCCGACCGGGTTCTTCTCATGGAGGAAGCTAAGAAGATAACATTTGAGCTAACAGTGAAACAACTGATGAGCTTTGATCCAGATGAATGGACTGAGAATTTAAGAAAAGAGTACATGCTTGTGATTAACGGCTTTTTCACTCTTCCTTTTCCTCTTTTCTCTTCCACCTACCGCAAAGCCATCAAGgcaAGAAGGAAGGTGGCAGAGGCATTGACACTAGTAGTGAGGCAGAGGAGAAAAGAGAGTGATATAGGCAAAGGCAAAAAGAATGACATACTTGGAGCATTGTTGGCATCTGGTGAACAATTATTAGATGAGCAAATAGTGGATTTTATGTTGGCTTTGCTCATAGCTGGTTATGAAACAACTTCTACTATAATGACTCTTGCTATCAAGTTCCTCACCGAGACTCCTTTAGCCTTGGCACAACTCAAGGTACAAATAGAGATCATGTAA 921 0.3985 MAYFLFFIIFVIFLFLLRKLRYSTLRLPPGSLGLPFIGETLQMISAYKSDNPEPFIDQRVNRYGSIFTSHVFGEPTVFSADPETNRFILMNEKLFECSYPGSISNLLGKHSLLLLKGSIHKKMHSLTMSFANSTIIKDHLLFDIDRLIRLNMDSWSDRVLLMEEAKKITFELTVKQLMSFDPDEWTENLRKEYMLVINGFFTLPFPLFSSTYRKAIKARRKVAEALTLVVRQRRKESDIGKGKKNDILGALLASGEQLLDEQIVDFMLALLIAGYETTSTIMTLAIKFLTETPLALAQLKVQIEIM 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g01845 306 Pfam Cytochrome P450 197 300 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g01845 306 Gene3D Cytochrome P450 18 305 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g01845 306 SUPERFAMILY Cytochrome P450 20 299 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g01845 306 PANTHER CYTOCHROME P450 26 6 302 - -
Tsu03g01845 306 PANTHER CYTOCHROME P450 90A1 6 302 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g01845 Tsu-Chr3 18982982 18987221 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu03g01845 115 304 Cytochrome P450 AT5G05690 75.789 3.09e-95 284
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g01845 K09588 - gmx:100775886 478.404
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu03g01845 03 18982982 18987221 Tsu03g01845 03 18982982 18987221 ECH
Tsu03g01845 03 18982982 18987221 Tsu05g03334 05 44649964 44655895 PCT