Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g01843 ATGGCCACCACAACCGCCGCCGCCACGTCACACTTTTTCGGCACTCGTCTTTCCAACAAACCAacctcaaacaaacaaacctcaAACATGGGAAGAGTCAGTGCATTCTTCAACCTCCCCGCCAAATTAAAACCACAACCAAAGAAAAAGGAAGTAAAAAAAGTGAAACAGCCGGAAAGTGATGGACTCGTGTGGTTTCCTGGTGCACAGCCACCAGAATGGCTCGACGGTACAATGATCGGTGACCGTGGATTTGATCCATTGGGATTTGCTAAACCGGCAGAGTATTTACAGTTTGAACTTGACTCACTTGATCAGAATCTAGCTAAGAACCTTGCCGGTGATATTATTGGAACTAGGGTGGAAAGTACGGAGGTTAACCCGACGCCGTTTCAGCCGTACACGGAGGTTTTTGGGATTCAGAGGTTTCGTGAGTGTGAAGTTATTCATGGAAGGTGGGCTATGCTTGGTGCTCTTGGTGCTTTGGCTGTTGAAGCTTTCACTGGTGTCGCATGGCAAGATGCTGGAAAGGTAGAGCTTGTAGAAGGGTCATCCTACTTTGGATTACCTCTTCCATTCTCAATTAGCACATTGATATGGATTGAAGTATTAGTAATTGGCTACATTGAGTTTCAAAGGAATGCAGAACTTGACCCAGAGAAAAGGTTATACCCAGGTGGAAAATTCTTTGATCCTCTTGGTTTGGCCAGTGACCCTGAAGAGAAAGAAAGACTTCAACTTGCAGAGATTAAGCATTCTCGCTTGGCTATGATTGTCTTCCTCATCTTTGCAATCCAAGCTGCTGTTACAGGAAAAGGACCTATTGGTTTCATTGCTACCTTCAACCAGTGA 852 0.4425 MATTTAAATSHFFGTRLSNKPTSNKQTSNMGRVSAFFNLPAKLKPQPKKKEVKKVKQPESDGLVWFPGAQPPEWLDGTMIGDRGFDPLGFAKPAEYLQFELDSLDQNLAKNLAGDIIGTRVESTEVNPTPFQPYTEVFGIQRFRECEVIHGRWAMLGALGALAVEAFTGVAWQDAGKVELVEGSSYFGLPLPFSISTLIWIEVLVIGYIEFQRNAELDPEKRLYPGGKFFDPLGLASDPEEKERLQLAEIKHSRLAMIVFLIFAIQAAVTGKGPIGFIATFNQ 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g01843 283 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 1 282 IPR001344 GO:0009765|GO:0016020
Tsu03g01843 283 Pfam Chlorophyll A-B binding protein 71 267 IPR022796 -
Tsu03g01843 283 MobiDBLite consensus disorder prediction 1 31 - -
Tsu03g01843 283 PANTHER CHLOROPHYLL A-B BINDING PROTEIN CP29.3, CHLOROPLASTIC 1 282 - -
Tsu03g01843 283 SUPERFAMILY Chlorophyll a-b binding protein 62 280 - -
Tsu03g01843 283 Gene3D Chlorophyll a/b binding protein domain 62 283 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g01843 Tsu-Chr3 18964181 18967502 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu03g01843 27 280 Chloroplast and Mitochondria Gene Families AT3G08940 70.472 1.71e-128 365
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g01843 K08915 - gmx:100794604 444.891