Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g01821 ATGCATAATAGTACTAAACTATCTACCAAAACTGGAGGATTTGGCATGAAATCATATAGTAATTTGAACTTGCTGCAGGTGAATGAAGATATAGGGGTTATTAATCATATAAGGAATCTTTTTTTCTCTACTCAAGGTCATTCAATAGACCACATTCCGAGTCAAATAGAAAGTAATTTGAAGAGCTCTTCATCTCAGCCGGATGTCTTGAAGGAAAATTTGTCTTCGGATATTATGGCTGTGTGCTTACATGATACCGAGAGAACTATGAGGAATGAAACAGTGGATGTTTTGACGCCCCTTAAATGTTCTGGGAGGAACAATTCAACTCATTCTGCTTACTGGGAAATGAGTGATGATATGGTCAAGCATGAAGGACCCGAACTCTATAGTGATGTGAGTCCCATTTTGCTTCAGTCAATGTCCGACATGATTAATGTGGAGCATCAAGAAGGGTCAAGTAGTGTCTGCAAAAATATGAGATTTGAATCGGAACAAATTCGATCATCATTTTTGAACAATTCTGCTATAAATAATATTGGCGTTAATGATTTAATTTATCAATCAGAAAAGGCCAGAGTTGATTCTGCATGCTTTCCGACTGTTTCTACCAATGCAGATATTTGTGAAAATGGTAAGTTGCATTATGTGGATACTCACCAAAGAGGGGTGTTGAATATTTCCAAACCTTTAGATGCTAACTCCCATAAACATACCAAAACTTCGGAGTTTCAAATTGGCTCTTGCGACAAGGATACCTCATACTTTCGAACTGAACCGATGCAGTTTCCGGCTGGCTGTGAACTATATGAAGCACTTGGACCAGCTTTGAAAGGgaataaatattttgatttgctAGCACAGGTTAATCAAGATATGAACATTGTGGATATACCAGATGCGATTAACACTAGTCAATTGACTTCTGAATCTCTTCCTGAGCATCTTTTGGAAGCAATGGTGGCCAACATTAGTCACAGTAGTAATAATGATGTTAATAGTGAGTTATCCTTTTGTAGATCAATGCAATCTGCAATTAGTTCTGGAAAAACACCTGAAGCTTCTATTCACAATATGCATACTATAGATCATCCTTCTCTTGTCAGAGAGGACAAACACCATTGTTTGAGTTCATCATCAGGGATATGTGGTGTGATATCACCTAAAGGTGTTTCTTCTACATGTCCTAGTGCTTCTAGTGAACAACTTGAAAGGTCTTCTGAACCGTCTAAGAACAGCAAGAAGAGGGCTAGGCCCGGGGATAGTTGCAGACCTCGTCCAAGAGACAGGCAACTGATCCAAGATCGAATTAAGGAGCTGAGAGAGCTGGTACCAAATGGAGCAAAGTGCAGTATTGATTCCCTACTGGAGCGCTCGATAAAGCACATGCTTTTTCTGCAAGGCATAGCTAAGCATGCTGACAAGCTAACTAAATTTGCTGATACTAAATCAAAGTTGCATCATATGGAAACAGATATTCTTGGATCCTCTAGTTCAGAGCAGGGTTCAAGTTGGGCAGTGGAGGTAGGGGGTCATCTGAAAGTTCATTCAATATTAGTCGAGAATCTTAGCAAGAATGGACAGATGCTTGTTGAGATGTTATGCGAGGAATGCAGCCATTTTCTTGAAATAGCAGAAGCCATAAAAAGCTTAGGCCTTACCATTTTGAAGGGTGTAACAAAAGCTCATCGGGATGAGAAGATATGTATATGCTTTATTGTTGAGGGTGAAAACAACAGAAATGTACATAGATTGGACATCTTGTGGCCGCTTGTTCAGATACTGCAATCCAAGAGTGTTGTGTATCAACAGTGA 1815 0.3912 MHNSTKLSTKTGGFGMKSYSNLNLLQVNEDIGVINHIRNLFFSTQGHSIDHIPSQIESNLKSSSSQPDVLKENLSSDIMAVCLHDTERTMRNETVDVLTPLKCSGRNNSTHSAYWEMSDDMVKHEGPELYSDVSPILLQSMSDMINVEHQEGSSSVCKNMRFESEQIRSSFLNNSAINNIGVNDLIYQSEKARVDSACFPTVSTNADICENGKLHYVDTHQRGVLNISKPLDANSHKHTKTSEFQIGSCDKDTSYFRTEPMQFPAGCELYEALGPALKGNKYFDLLAQVNQDMNIVDIPDAINTSQLTSESLPEHLLEAMVANISHSSNNDVNSELSFCRSMQSAISSGKTPEASIHNMHTIDHPSLVREDKHHCLSSSSGICGVISPKGVSSTCPSASSEQLERSSEPSKNSKKRARPGDSCRPRPRDRQLIQDRIKELRELVPNGAKCSIDSLLERSIKHMLFLQGIAKHADKLTKFADTKSKLHHMETDILGSSSSEQGSSWAVEVGGHLKVHSILVENLSKNGQMLVEMLCEECSHFLEIAEAIKSLGLTILKGVTKAHRDEKICICFIVEGENNRNVHRLDILWPLVQILQSKSVVYQQ 604
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g01821 604 PANTHER TRANSCRIPTION FACTOR BHLH155-LIKE ISOFORM X1-RELATED 24 604 IPR043561 GO:0003700|GO:0006355
Tsu03g01821 604 MobiDBLite consensus disorder prediction 407 430 - -
Tsu03g01821 604 MobiDBLite consensus disorder prediction 394 430 - -
Tsu03g01821 604 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 417 466 IPR011598 GO:0046983
Tsu03g01821 604 PANTHER BHLH TRANSCRIPTION FACTOR-LIKE PROTEIN 24 604 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g01821 Tsu-Chr3 18751855 18755060 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu03g01821 24 599 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31280 36.538 8.39e-94 302
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g01821 - - ccaj:109796613 774.237