Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g01808 ATGGATGAGGGAATGTCAGGCTTTTGTATTAGAAATGGAAGTGTTCGTGGCAGTAGTGGAACAAAATGTGGTCGTTGGAATCCAACTACTGAACAAGTTAAGGTTCTGACTGAACTTTTTAGTTCTGGACTCCGTACACCAAGTACTGATCAGATTCAAAAGATTTCTACTCAGCTTAGTTTTTATGGTAAGATTGAGAGTAAGAATGTTTTTTATTGGTTTCAAAATCATAAGGCTAGGGAAAGACAAAAGCGTCGTCGGAGGGTTTCGTCTTCTGATGATGACGATGACAATGATAGTAATAAGGATGTGATTCGTCGAACAAATGTTATGTCTGTTAATTCTTCTACACAAAATTTTGCTCAGGTCTATAAGGTTTCAGAGCCAAAGAGAGTGATTGAAACACTTGAGCTATTCCCTTTGAACTCATATGGTGAACCAGAATCAAAGAATTTGAGAGTCTATGCAAATGAACGTAGGGATAATATGTTTTCATACACAATGAGGGAACAAATGGATCACCCACCATTAGATCTTTGCTTGAGTTTTATAATCGTTGTCGCCGGTGCCACTCCTTCGCAGTACGGTTGCAACAAAGGGGAGATTTATACTTGTAGGTATTCTGATGCTCAAGATCAAAACCCAAGATTGGTAGTAGATGCCAACCATTCTTATGTCGACCGTTACAGAAGGCCAGCTTACTTGACCGTTGGGAAGGAGAAGGCGATCATTGCCCTTCGTCTAATTTGGGCTGAGTTCAGCGCAGAGGAGGAGGATCACCTCAGAGATTGGACCTGA 798 0.4085 MDEGMSGFCIRNGSVRGSSGTKCGRWNPTTEQVKVLTELFSSGLRTPSTDQIQKISTQLSFYGKIESKNVFYWFQNHKARERQKRRRRVSSSDDDDDNDSNKDVIRRTNVMSVNSSTQNFAQVYKVSEPKRVIETLELFPLNSYGEPESKNLRVYANERRDNMFSYTMREQMDHPPLDLCLSFIIVVAGATPSQYGCNKGEIYTCRYSDAQDQNPRLVVDANHSYVDRYRRPAYLTVGKEKAIIALRLIWAEFSAEEEDHLRDWT 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g01808 265 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 1 173 IPR044555 GO:0003700|GO:0099402
Tsu03g01808 265 ProSiteProfiles 'Homeobox' domain profile. 19 84 IPR001356 GO:0003677
Tsu03g01808 265 Pfam Homeodomain 23 83 IPR001356 GO:0003677
Tsu03g01808 265 SMART HOX_1 21 88 IPR001356 GO:0003677
Tsu03g01808 265 Gene3D - 22 89 - -
Tsu03g01808 265 MobiDBLite consensus disorder prediction 86 104 - -
Tsu03g01808 265 CDD homeodomain 25 79 IPR001356 GO:0003677
Tsu03g01808 265 MobiDBLite consensus disorder prediction 82 105 - -
Tsu03g01808 265 PANTHER WUSCHEL-RELATED HOMEOBOX 7 1 173 - -
Tsu03g01808 265 SUPERFAMILY Homeodomain-like 24 86 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g01808 Tsu-Chr3 18619428 18622753 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu03g01808 8 184 Wox Gene Family AT3G11260 48.469 6.96e-52 166
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Tsu03g01808 Homeodomain 6.2e-18 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g01808 - - gmx:100791433 247.284
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu03g01808 03 18619428 18622753 Tsu05g03296 05 44321210 44322448 PCT