Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g01805 ATGGGAAAACATTGTTCTAATGATTCTACCACAGTCACAATCCTCTCAAAATCCATTGTTACCCCTAACCAAAAATCAACACTTGATAATCTCAAACTCTCAATCTCAGACCTTAACATGCTCTGTTGCCATTACATTCAAAAAGGCTGTCTCTTTACAGTACCATCTCTCCCTTCTGAAAAACTCATTCCTCATATCATAaattctctctctaaaaccctCTCAATCTTCCCTCCTCTCGCCGGCCGTCTCGTAACCGACTCCGACGGTTACATCTATATCACATGCAATGACGCTGGTGTCGATTTCATCCATGCAATGGCCACTCAATTTACCATCACTGACATTTTATCACCGTCTGATGTTCATCAagcattcaaagaatttttccCTTTTCACCGGAAAATCAATCACACTGCTCATTTCTCACCGATTTTGGCTGTTCAGGTAACTTCCCTCGCCGACGGAATTTTCATCGGCGTCGCTGTTAGCCATGCTGTCACCGATGGTTCTACGCTCTGGAATTTCTTCAATACGTTTGCTGATGTTTCCAGAGGAGTTACAGATTTCCAACGGCTCCCGGATTTCCGCCGGGAATCAATTTTGATGTCCAAAATCGCTGTTCAGTTACCGGAAGGTGAAATTAAGGTATCGTTTGACGCGGATGCGCCTTTACGGGAGAGAATTTTCAGCTTCAGTAGAGAATCAATTCAGAAACTTAAAGACACGGTGAACTACCACCGTGTTTCGCCGAGGGAAGATTGTGTGATTGAGATGATATCAAAGTTCAGAAATGATCCAACGGTTATGTCTCCGGTAGCTTTTGAAACGACGGAGATTTCATCGTTTCAGTCACTCTGCGCGCTGATGTGGCGATGCGTGACACGTGCTAGGAAACTTGAGGGTTCTAAAATGACGACGTTTAGAATGGCTGTGAATATTCGTAGCCGTTTGGAGCCAAAGTTACCACAGTATTATTTTGGGAACGCGATTCAAAGCATTGCCACGTATGCATCAGTGCGTGACGTGGTTGATAATGATCTTACGTGGTGTGCGGAGCAGTTGAATAAGAGTGTGAAGGAGTATGATAATGCTACGGTGAGGCGTGTCGCTGGGAATTGGGACCTTGAGCCGAAGTGTTTTCCGATGGGGAATCACGAAGGTGGGACATTGCAGATGGGTAGTTCGCATAGGTTTCCGATGTATGAGAATGATTTTGGTTGGGGGCGGCCGTTGGCTGTGAGGAGCGGTGGAGCTAATAAGTTTGATGGGAAGATGTCAGCCTTTCCAGGCAGGCAAGGTGGTGGAACTATTGATTTGGAGGTGGTTTTATCGCCTGAAACAATGGCGCGGCTTGAGACTGATTCAGAGTTTATGCTTTACGCTTCTTCTTGTCAACAGTGA 1404 0.4437 MGKHCSNDSTTVTILSKSIVTPNQKSTLDNLKLSISDLNMLCCHYIQKGCLFTVPSLPSEKLIPHIINSLSKTLSIFPPLAGRLVTDSDGYIYITCNDAGVDFIHAMATQFTITDILSPSDVHQAFKEFFPFHRKINHTAHFSPILAVQVTSLADGIFIGVAVSHAVTDGSTLWNFFNTFADVSRGVTDFQRLPDFRRESILMSKIAVQLPEGEIKVSFDADAPLRERIFSFSRESIQKLKDTVNYHRVSPREDCVIEMISKFRNDPTVMSPVAFETTEISSFQSLCALMWRCVTRARKLEGSKMTTFRMAVNIRSRLEPKLPQYYFGNAIQSIATYASVRDVVDNDLTWCAEQLNKSVKEYDNATVRRVAGNWDLEPKCFPMGNHEGGTLQMGSSHRFPMYENDFGWGRPLAVRSGGANKFDGKMSAFPGRQGGGTIDLEVVLSPETMARLETDSEFMLYASSCQQ 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g01805 467 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 9 462 - -
Tsu03g01805 467 Pfam Transferase family 11 459 - -
Tsu03g01805 467 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 9 462 - -
Tsu03g01805 467 Gene3D - 9 209 IPR023213 -
Tsu03g01805 467 Gene3D - 212 454 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g01805 Tsu-Chr3 18594683 18596086 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu03g01805 12 453 Monolignol Biosynthesis Gene Families AT5G48930 27.273 8.71e-40 147
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g01805 - - cam:101506439 713.761
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu03g01805 03 18594683 18596086 Tsu05g03293 05 44296834 44298547 ECH
Tsu03g01805 03 18594683 18596086 Tsu03g01805 03 18594683 18596086 ECH
Tsu05g03293 05 44296834 44298547 Tsu03g01805 03 18594683 18596086 PCT