Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g01797 ATGGCAAAGAAAAAGCAACCACCAACCACCGCCGCGGCGGCCAAAGATGATGAACCACTCACCCCCGCCTCAAAGAAAGACCAACCGCCACCTTCCAAAAAGCCAGAAGAAGACAAAGTAGAAGAAAAAGATGACGAAGATTCAACATCGGAAGAAGCTTCATCATCTGAAGGAGAAGAATCTGATGATGGATCatcagaagatgatgatgatgaagaacaacaaaaaacacCTTCTTCACAACCTGCTTCCAAAACCGCTCCATCTGCAAAATCAGGATCcaaaaaagatgaagaagaagaagacgacGATGAAGAAACCGATTCAGATTCTGATCATGAACCACCTCCCAAACTCAAATCCATCAACTCAAAATCCATCGATCGAACCCTAAAATCAAAGCCTGAACCAAAATCCACCGCCACACCGGCCAGATCTGGAACCAAACGTTCCGCTGAAGATGACACCAAAcaatcaaagaaaaagaaaacaaccgTCACCTCTGACAATgcgaaagagaaagagaaagagaaggagGAGGATAACAAGAAACCTGGTGACGACTCGAAAAAATTGTTTCAGAGAGTTTTCAACGAAGATGATGAAGTCGCAATTCTCCAAGGTTTGGTTGAATTTACTGCGAAACCGGGGAATGATCCTGTCAAATATCCAACAGCTTTTTATCAGCATGTGAAAGATTCGATCCATTTTCCGGTTACACTCGAGCAACTGAAAGATAAGGTTCGAAGGCTGAAGGGGAAATTCGAGACTAAAATGAAGAATTGTAAGAGTGGAAAGCCTCCTACTTTCTCAAAACCTATTGaggagaaaatgtttgaatatgGCAAAAAGATTTGGGGTGGTAAAATTGGTGAAGAAAATGGAAAAACTGATGAGAAACCTTCTAAGAAGGGTGCTGCTAAGAAATCACCAACAACAAAGAAATTGGTGATGGAACCTGATTTGCTGGTGGTTTCGAACGAAACTAGAAAGGAGAATCCTGGTTCGAgttatattttgaatgaaatggATCGATTTGACAAGAGTTTATCAGGTGTTTTTGGGTCGAGCATGGATTTGATGAAGAGCGGATTGGAGTTGCTTGAGGAATCGAAGAGAGTAGAGTTGGAGACAAGGTGGAAGGAGTTGCGCTTTGCTGAATTGAAGTTGGTTGCTATGCGAGCTGAGTTGGCTGTGGATCAAGATGGGCTGGGCAAGGGACTAATCCATTCTCAAACTCCTTCCGGTGACCTTGTTAGTTATAAATCAAGGATTGATCACATGCAAGTACACGAGGATATACTAGAGGAACCTATAAATATTGATAATCTCCACCAACAAGACATGCGAGGGAATCACCATGAAAATTGGAAAGACAAGCATGCTCAATGGATTGAATATTGGAATGATAGAGATAATCATTGTCTTACGGGTCAACCGATACAAGGAGACCTCATCCCGAGCAACGAGTATATGATATGGCTTATGAAGAGCCAGAGCCAAAGCTGCGGAATATGA 1518 0.3867 MAKKKQPPTTAAAAKDDEPLTPASKKDQPPPSKKPEEDKVEEKDDEDSTSEEASSSEGEESDDGSSEDDDDEEQQKTPSSQPASKTAPSAKSGSKKDEEEEDDDEETDSDSDHEPPPKLKSINSKSIDRTLKSKPEPKSTATPARSGTKRSAEDDTKQSKKKKTTVTSDNAKEKEKEKEEDNKKPGDDSKKLFQRVFNEDDEVAILQGLVEFTAKPGNDPVKYPTAFYQHVKDSIHFPVTLEQLKDKVRRLKGKFETKMKNCKSGKPPTFSKPIEEKMFEYGKKIWGGKIGEENGKTDEKPSKKGAAKKSPTTKKLVMEPDLLVVSNETRKENPGSSYILNEMDRFDKSLSGVFGSSMDLMKSGLELLEESKRVELETRWKELRFAELKLVAMRAELAVDQDGLGKGLIHSQTPSGDLVSYKSRIDHMQVHEDILEEPINIDNLHQQDMRGNHHENWKDKHAQWIEYWNDRDNHCLTGQPIQGDLIPSNEYMIWLMKSQSQSCGI 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g01797 505 MobiDBLite consensus disorder prediction 148 191 - -
Tsu03g01797 505 MobiDBLite consensus disorder prediction 1 191 - -
Tsu03g01797 505 MobiDBLite consensus disorder prediction 111 135 - -
Tsu03g01797 505 Coils Coil 241 261 - -
Tsu03g01797 505 PANTHER STOREKEEPER PROTEIN 29 401 - -
Tsu03g01797 505 MobiDBLite consensus disorder prediction 290 312 - -
Tsu03g01797 505 MobiDBLite consensus disorder prediction 19 40 - -
Tsu03g01797 505 PANTHER BNAANNG10740D PROTEIN-RELATED 29 401 IPR007592 GO:0006355
Tsu03g01797 505 MobiDBLite consensus disorder prediction 41 74 - -
Tsu03g01797 505 MobiDBLite consensus disorder prediction 290 306 - -
Tsu03g01797 505 Pfam Protein of unknown function, DUF573 193 287 IPR007592 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g01797 Tsu-Chr3 18460357 18464742 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu03g01797 118 398 GeBP Transcription Factor Family AT4G25210 31.293 2.09e-23 100
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GeBP Tsu03g01797 DUF573 9.6e-28 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g01797 - - cam:101509961 267.314