Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g01763 ATGCTGAGAGCATGTGTGTTAGAAGATGGAGGCAGTTGGGGTAACTACATGCACTTGATTGAGTTCGCATACAACAATGGTTACCATTCCAACATCGAAATGGCTCCATATGAAGCCCTCTATGGTAGGAAGTGCATGACACCTTTGTGTTGGGCCGAAGTTGGTGAAAAGACAGTCGCCGAGAGTTATGCGGATAAAGGACGACGGTCAGTGGAGTTTAAGGAAGGTGATCACGTGTTTTTTAACGTAAATCTTATGTTGAAGTTAAGAGGTGTGTTTAAAACCAAGAAGTTGTGCCCGGGATACATTGGTATGTTTCAAATCATTGAACGAGTAAGTGAGGTAGCCTACAGACTAGCATTGCCTCCGGTTACTCCTATAGCTGCAAGGAGTATCAAACTGCGTGACGGTCACAAGGTGTGTTCTCAAGGAGTGTGTAAAGGAATTAAAATGCAAGTAGGGTCAATTGAGATAATGGTTGATGCATTAGTGCTGGAGCTAGGAGGGTTGGATGTGGTGTTAGGAGTGTCTTGGTTGAGTACACTGGAGGAAGTACTCACAATAGAGGAGGTTTGGAGTGGTGGTGGTCTTTGGAGTGTGGGTCCAAAGCTGCTAAATGCAGAAAATGTTGTACCTCCAAAATCAATCATGGGCACAACCTTAGGAAATGATGAGAATTGGTTGCTAGGATGTCTAATTCTTTTTGGAAGTTGTGTTGCTTGGTCAGTTTGGCTCATTCTGCagGTTCCAGCTTATGCAAGCCATCCTAATTCCTTATCACTTTCAGCTTGGATGTGTTTAATGGCAACATTACAATCATCACTAGTGACACTATTCATGAAGCCAGACCTGAATGCATGGAAGATTAATTCTCTACTTCAATTTGGTTGCATTTTATATTCAGTTGGAAGTGGTGAAACTGTGAGGTATTGGGAGGAAAATTGGTtcggaaattttaatttatgctGTGAGATTGAGGATCTTAATGGGATTGTTGTGGACTGCAACATTGGCATGAAAAACTGGAATTGGCAGTGGGTTCGGGAGTTGAACGAAAGCGAGGACATCAGAAAATCCGAACTTGAGGAGTTGTTATCGGGAGTGGCTCGGCATGAAAGAGCTGCAGATGTAATGAGTTTTGTTGGATCCAATATGGAGAGCAGAATTTTTCTGTTCACGGCTGTTTTAAATTTCTGCGTAATCTGCAAGTTCGTGATGATGTGGTAG 1227 0.4222 MLRACVLEDGGSWGNYMHLIEFAYNNGYHSNIEMAPYEALYGRKCMTPLCWAEVGEKTVAESYADKGRRSVEFKEGDHVFFNVNLMLKLRGVFKTKKLCPGYIGMFQIIERVSEVAYRLALPPVTPIAARSIKLRDGHKVCSQGVCKGIKMQVGSIEIMVDALVLELGGLDVVLGVSWLSTLEEVLTIEEVWSGGGLWSVGPKLLNAENVVPPKSIMGTTLGNDENWLLGCLILFGSCVAWSVWLILQVPAYASHPNSLSLSAWMCLMATLQSSLVTLFMKPDLNAWKINSLLQFGCILYSVGSGETVRYWEENWFGNFNLCCEIEDLNGIVVDCNIGMKNWNWQWVRELNESEDIRKSELEELLSGVARHERAADVMSFVGSNMESRIFLFTAVLNFCVICKFVMMW 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g01763 408 PANTHER WAT1-RELATED PROTEIN 201 315 IPR030184 GO:0016021|GO:0022857
Tsu03g01763 408 CDD retropepsin_like 113 179 - -
Tsu03g01763 408 Gene3D - 1 71 IPR036397 GO:0003676
Tsu03g01763 408 PANTHER WAT1-RELATED PROTEIN 201 315 - -
Tsu03g01763 408 Pfam Retroviral aspartyl protease 137 188 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g01763 Tsu-Chr3 18041613 18045560 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu03g01763 201 315 Nodulin-like Gene Family AT4G30420 45.690 2.72e-27 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g01763 - - gmx:100812331 144.821