Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g01759 ATGAATTCAAAAGAAGAGAAGATATCTGGTCATGATAATGATAGAAGCCAACAGCTTCAAGTAATCATGACACCACATTTGCAACTCCAAACACCAGGCATTGATATCACCACAAATCACAGCACCCAAGCATCATCCTCTATTGTTGGAGGCCGCCCCCGAGGGCGTCCTCCTGGCTctaaaaatatttcaaagacTCCTATTGTAGTAGCAAATGTCAATTCCAATCCACTCGGTTCTCATATGATTGAGATATCTTCTAGAAACGACGTGTCAAAACGCCTTTTTGATTATTCTCATCGTCAAGGGAGGGGCATCTGCATCCTCAATGCAAATGGAGAGGTGGCACAAGTCAAAGTCCGTCAATCAACGGGGATGATTGCCACTCTTATAGGAAGATTCAAGATTATTTCAATAACTGGGACAATTCATCCGTCATTGGAAAATCCGAAAGAATTGACAATTTGCTTATCAGACCCTGGAAATAGGTTTATTGCAGGGAGTGTGATACCCCTCTTGTAG 522 0.4138 MNSKEEKISGHDNDRSQQLQVIMTPHLQLQTPGIDITTNHSTQASSSIVGGRPRGRPPGSKNISKTPIVVANVNSNPLGSHMIEISSRNDVSKRLFDYSHRQGRGICILNANGEVAQVKVRQSTGMIATLIGRFKIISITGTIHPSLENPKELTICLSDPGNRFIAGSVIPLL 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g01759 173 MobiDBLite consensus disorder prediction 38 64 - -
Tsu03g01759 173 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 29 36 173 - -
Tsu03g01759 173 ProSiteProfiles PPC domain profile profile. 75 173 IPR005175 -
Tsu03g01759 173 SUPERFAMILY AF0104/ALDC/Ptd012-like 76 171 - -
Tsu03g01759 173 CDD DUF296 81 170 IPR005175 -
Tsu03g01759 173 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 36 173 IPR014476 GO:0003680
Tsu03g01759 173 Pfam Plants and Prokaryotes Conserved (PCC) domain 81 170 IPR005175 -
Tsu03g01759 173 Gene3D - 80 173 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g01759 Tsu-Chr3 18012248 18012769 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu03g01759 30 173 AT-hook Motif Nuclear Localized (AHL) Family AT1G76500 40.506 6.24e-25 96.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g01759 - - cam:101492608 140.969