Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g01736 ATGGAAACTATTGTCATTGAGATCCCTCGTGGGGAAGATATTGTGGAGTGTATAATCAACTATGCACGACACCGCCAAGTCAGCATAACTATGTTGAGTGGCTCCGGTCCTGTCTCTAGCGTTACCCTTTTACAACCAATATCTGGTGCCTCGAATTTCATGGAAGGACCATTCCATATGACATCTCTCTTTGGTACATATATCAATGTCAATAGTGATGATGTTCCCCCACAGTTCATCACTAATCCACCACATTCATCATTTTCGATTTGCTTCACTAACAATGATGGAAAGATTTTTGGAGGAATTGTTGGAGGACGAATTATTGCTGATGACGTAGTTTACGTTAACGCTATTATTACCAATGGTTTTGATGTTGTGGTTGCTAAGATTGACACTGAGAATGATAGCGACTAG 417 0.4053 METIVIEIPRGEDIVECIINYARHRQVSITMLSGSGPVSSVTLLQPISGASNFMEGPFHMTSLFGTYINVNSDDVPPQFITNPPHSSFSICFTNNDGKIFGGIVGGRIIADDVVYVNAIITNGFDVVVAKIDTENDSD 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g01736 138 CDD DUF296 3 110 IPR005175 -
Tsu03g01736 138 Pfam Plants and Prokaryotes Conserved (PCC) domain 3 116 IPR005175 -
Tsu03g01736 138 Gene3D - 1 135 - -
Tsu03g01736 138 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 1 119 - -
Tsu03g01736 138 SUPERFAMILY AF0104/ALDC/Ptd012-like 1 123 - -
Tsu03g01736 138 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 1 119 IPR014476 GO:0003680
Tsu03g01736 138 ProSiteProfiles PPC domain profile profile. 1 138 IPR005175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g01736 Tsu-Chr3 17696346 17696762 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu03g01736 1 122 AT-hook Motif Nuclear Localized (AHL) Family AT5G49700 34.127 2.31e-15 68.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g01736 - - cam:101498344 123.635