Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g01717 ATGGCAAAAACACCCCTACTTTTTCTCTGCATATTGATTCTTCTAGCCTCAAACTCCATAACACAATCTCATTCTCAACAAgatgagtttttcttttctggATTCAATGAAGCTGCTACCAACATAACCTTAAATGGAGGTGCAGTAATTGAACACAAAGGAACAATTCGTTTAACAAATGACACAGAAAGAGTACTTGGTCATGCTTTTTATTCAACACcaatcaaattcaaaaacaacaaaaacaccaaAGTTTTCtccttttcaacttcttttGCTTTTGCAATTATTCCTCAATATCCAAAACTAGGAGGCCATGGATTTGCTTTCACCATTTCACCTTCCAACAAACTCTCCAATGGTTATCCAAGTCAGTACTTAGGCCTTCTTAACCCACATGATTTAGGCAACTTTTCAAATCATCTATTCGCAGTTGAATTCGACACAGTTCAAGACTTTGAATTCAATGACATCAATGATAATCATGTTGGTATCAACCTTAACAACATGGTATCAAACAAATCAGTAAAAGCATGTTTTTTTACTGATGGGTTAGTTCAAGATCTCAATTTGAAGAGTGGTAGTGTGATTCAAGCATGGATTGATTACAATTCTTCAATGAATCATCTTGAAGTTAGACTTTCACCAACTTCATCAAAACCAAGTTCACCAATCTTATCATACAAAGTAGATCTAACACCAATTCTTCAAGAAACTATGTATATtggtttttcttcttcaacaggGTTACTCTCTAGCTCACACTATATACTTGGTTGGAGCTTCAAAATCAATGGTGAATCCAAAACACTGTCTTTGAAACATCTTCCTTCACTCTCTTCACATGGCAATAACAGTAAAAAGTCCTTAATCTTAGAAGCTTGGGAACTTGAAGTAGGACCACATAGATTCTCTTACAAAGAATTGAAGCATGCAACAAAAGGGTTCAAGGAAAAAAACCTTCTTGGATTTGGAGGTTTTGGTAAAGTTTACAAAGGTATGTTAGTGTCATCAAATTCCAAAACTGATATTGCTGTGAAACAAATCTCTCATGAATCAAAACAAGGGGTACAAGAGTTCATATCTGAGATAGAAACAATAGGAAAACTTCGTCATAGAAACCTAGTACAGTTACTAGGTTGGTGTAGgaagaaaaatgatttaatcTTAGTGTATGATTACATGGAAAATGGAAGtttagataaatatatatttgaaaaaccaAGAAGAATATTGAAATGGGAAGAAAGGTTTAGGATTATAAAAGGTGTAGCTTGTGGGCTAGTTTATCTGCATGAAGAATGGGAACAAACTGTGATACATAGAGATGTTAAAGCTGGGAATGTTCTTTTGGATTCTGATATGAATGCAAAGTTAGGTGATTTTGGTTTGGCTAAGCTTTATGATCATGGAGAGAATCCAAGTACAACAAGGGTGGTTGGAACTATGGGATATTTAGCACCAGAGTTAACAAGAACAGGTAAACCAACGACAAGTTCTGATGTTTTTGCGTTTGGGGCGTTGTTGTTGGAGGTTGTTTGTGGAAGGAGGCCTATTGAGGCGAAAGCGTTGCCGGAGGAGCTTGTTTTGGTGGATTGGGTTTGGGATAGGTGGAGAGTAGGGGAAGTTATGGAAGTTGTGGATAAAAAGTTAGGTGGTGTTTATGATGAGGTGGAGGTTTTATTGGTGGTTAAGGTGGGTTTGTTGTGTTCTGATGAGTTGCCGGACAGGAGGCCGACGATGAGGCAGGTTGTTAGGTATTTGGAAGGGGAGGTGAAGTTGCCAGAGATTGATAAAAAGGCGGGGTTTTTGTATCAAAGGTCGGAGTTTTTTGAAAGGGTGAATACTTGGTCATCGGCCGGTGATGATGTGGAGAGTGCATTTGCATCCTCTCTTCAACTTTCCGGTGGCCGGTAG 1917 0.3584 MAKTPLLFLCILILLASNSITQSHSQQDEFFFSGFNEAATNITLNGGAVIEHKGTIRLTNDTERVLGHAFYSTPIKFKNNKNTKVFSFSTSFAFAIIPQYPKLGGHGFAFTISPSNKLSNGYPSQYLGLLNPHDLGNFSNHLFAVEFDTVQDFEFNDINDNHVGINLNNMVSNKSVKACFFTDGLVQDLNLKSGSVIQAWIDYNSSMNHLEVRLSPTSSKPSSPILSYKVDLTPILQETMYIGFSSSTGLLSSSHYILGWSFKINGESKTLSLKHLPSLSSHGNNSKKSLILEAWELEVGPHRFSYKELKHATKGFKEKNLLGFGGFGKVYKGMLVSSNSKTDIAVKQISHESKQGVQEFISEIETIGKLRHRNLVQLLGWCRKKNDLILVYDYMENGSLDKYIFEKPRRILKWEERFRIIKGVACGLVYLHEEWEQTVIHRDVKAGNVLLDSDMNAKLGDFGLAKLYDHGENPSTTRVVGTMGYLAPELTRTGKPTTSSDVFAFGALLLEVVCGRRPIEAKALPEELVLVDWVWDRWRVGEVMEVVDKKLGGVYDEVEVLLVVKVGLLCSDELPDRRPTMRQVVRYLEGEVKLPEIDKKAGFLYQRSEFFERVNTWSSAGDDVESAFASSLQLSGGR 638
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g01717 638 Gene3D Transferase(Phosphotransferase) domain 1 395 607 - -
Tsu03g01717 638 SMART serkin_6 316 588 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu03g01717 638 ProSitePatterns Protein kinases ATP-binding region signature. 322 347 IPR017441 GO:0005524
Tsu03g01717 638 ProSitePatterns Serine/Threonine protein kinases active-site signature. 439 451 IPR008271 GO:0004672|GO:0006468
Tsu03g01717 638 Gene3D Phosphorylase Kinase; domain 1 301 394 - -
Tsu03g01717 638 CDD lectin_legume_LecRK_Arcelin_ConA 29 266 IPR001220 GO:0030246
Tsu03g01717 638 Pfam Legume lectin domain 28 275 IPR001220 GO:0030246
Tsu03g01717 638 PANTHER - 6 291 - -
Tsu03g01717 638 PANTHER - 289 638 - -
Tsu03g01717 638 SUPERFAMILY Protein kinase-like (PK-like) 297 609 IPR011009 -
Tsu03g01717 638 PANTHER L-TYPE LECTIN-DOMAIN RECEPTOR KINASE IV.2-LIKE PROTEIN 289 638 - -
Tsu03g01717 638 CDD STKc_IRAK 322 590 - -
Tsu03g01717 638 Pfam Protein tyrosine and serine/threonine kinase 319 587 IPR001245 GO:0004672|GO:0006468
Tsu03g01717 638 Gene3D - 27 265 - -
Tsu03g01717 638 PANTHER L-TYPE LECTIN-DOMAIN RECEPTOR KINASE IV.2-LIKE PROTEIN 6 291 - -
Tsu03g01717 638 ProSiteProfiles Protein kinase domain profile. 316 597 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu03g01717 638 SUPERFAMILY Concanavalin A-like lectins/glucanases 28 279 IPR013320 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g01717 Tsu-Chr3 17534564 17536564 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu03g01717 29 604 Receptor kinase-like Gene Family AT3G55550 58.333 0.0 722
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Tsu03g01717 PK_Tyr_Ser-Thr 2.4e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g01717 - - gmx:100804136 885.945
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu04g01182 04 11752445 11754650 Tsu03g01717 03 17534564 17536564 ECH
Tsu03g01717 03 17534564 17536564 Tsu03g01717 03 17534564 17536564 ECH