Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g01673 ATGGCGCTGTTCCGAAGATTCTTTTACCGGAAACCGCCGGATCGTCTTCTTGAGATCTCCGAGAGAGTCTACGTTTTTGATTGCTGCTTCTCTACGGACGTCTTGGAAGAGGATGAGTACAAAGTCTATATGGGGGGCATTGTAGCTCAGCTACAAGATTACTATCAAGATGCTTCTTTCATGGTATTCAATTTCAGAGAAGGGGATAGGCGCAGCCAAATTGCAGACCTTTTATCTCTGTGTGACATGACAGTTATGGAGTACCCTCGGGAATACGAGGGCTGTCCACTTCTGCCTTTAGAGATGATTCATCACTTCCTTCGATCAAGTGAAAGCTGGCTGTCTTTGGAGGGGCAACAAAATGTGCTTTTGATGCACTGTGAAAGAGGGGGATGGCCCGTGCTGGCGTTTATGCTAGCCGGTCTTTTATTGTACCGAAAACAATACAGTGGGGAGCTGAAGACTCTTGAAATGGTCTATAAGCAAGCACCTAGACAACTTCTCCAGCTTTTATTACCTTTGAACCCACAACCTTCTCAGTTAAGATATCTTCAGTATATTTCCAGGAGACATTTGGGTTCTGAGTGGCCTCCATCAGAAACACCCTTATATTTGGATTGTTTGATTCTAAGAGTTCTTCCATTATTTGATGATGGAAAAGGTTGCAGGCCTGTTGTACGTGTTTATGGTCCGGATCCTTCAAATCCTGCCAATAGAAGTTCTAAGCTTCTTTTCTCAACTCCAAAAAATCAAACACACGTCCGCCACTACCTACAGGCAGAATGTATGCTCGTGAAAATTGATATTCGTTGTCGTGTTCGAGGGGATGTCGTTCTTGAGTGCATACATTTAAGTGAAGATTTCGTTCGTGAGGAGATGATGTTTAGAGTCATGTTTCATACAGCGTTTGTACGGTCAAATATTTTGGTGCTGAACCGTGATGAAATGGATATGTTGTGGGATACAAAGGATCAGTTCTCCAAGGATTTTAAATCTGAgGTGCTTTTTTTGGATGCTGATGCTGTTATACCTGATCTAACCACAGTCGATGTGAGTGGAGACGAAAATGAAACAGAAAGCGGTTCACCTGACGAATTCTATGAAGTGGAAGAGATCTTCAGCAATATAATTGATGCACAGGATTCTCCAAGGGTTCGTGACAGTGCAGTCGAAGATGGAAGCCATAAAGATATCTGGAATGAGTATTCAGATCCTCATACTCTTCAGGATTCTACGCCAGATGATGGGATTCACCAGCAGGTTGGAACGACGGATTCTGGTATTAATGAAGTGAAAGACATTACTGTTGATGATGTGAATTACAAGCTCGATGAGCGTGTAGATTCAGACACTCATGTAGTGAAAGATATTGCTGTGGATGATGGGTACAATACGCCAAGTTCCATTGCAGTCACTTTTGATATGATGGAAACTCCTGAGAGACAGGAAGTCACTTTGGATGCGCATGAGGAGTTGGCAGTTATGCAATACAATTATGACAAAGATAACAACACACCACTAAAAGAATTAGAGCCTGAGGAAGGGCAGCAGATGCATGATCTTACCGGATCAATGTCTGTTGAAAATAACAAAGATTCCCATCAAGATTCGTTGCATGTTTCATATCCAACGACAAGGCATAATAGTTTACCAACTGCTCTGTTAAATGCTACTGCTGCAAAGGAGAAAATGACTAATACTGAAGAAAGACTTGTTTCTAGTTCTCATGTCAACGAAGCGGTTTCTGTGGACATGATAAATGATCTGAAAAGTTGTAATGGGAACAATTCAAAATCTTTAGAAAGCATAGGGGAAATAGACTCAAACGCCCAACCATCATCAATAATGCCAATTACAGAGTCATCTCATCAGACAACTACTCAAGCACCACAATTGAGCACTGATCAAATGGACCTACAAGCTGCAACTCCTCCACCCCCGCCTCCACCCCCACCTCCATTTTCTGGGAAAAATAGAGGGAGCTCATTACCTCATTGGCAGCCAGTTTGTTCATCCATTGATGAAATTGGAGAAAATAGTGGTGCTTCACCTCCTTTAACTCCTTCTATAGTAGGAAGTGCAATTACATCAAAAGCTTCTAAATTAATGGGCGCAGTCTCCCTTCCCTAtcctcctcctccaccaccaccacctccttCTCCTCCCACAAAATATGTAGTTACGTCCGTTCCACCTCCACCACCTCCCCCGCCGCCTCCTTTGTCTTACCTGGATAGAGCTCCACTCTTTCCTCCTTCAACACCAACATCACTTCACACTCCACCCCCACTACCTCTAActccaccaccaccacatccTTCAATGGGTAACgccccaccaccaccacctccaccaTTCTATGGagctccaccaccaccacctccaatGCATGGAGCACAAGCACCACCTCCTCCTCCACCTCCTCTAGGCGGTGGAGGCCCACCTCCTCCACCTCCAGGTTTTCGAGGCCCACCTCCTCCCCCACTTCCAGGTGGTGGAGGCCCACCTCCTCCGCCACTTCCAGGTGGTGGAGGCCCACCTCCTCCACCACCTCCAGGTGGTGGAGGCCCAGCTCCACCACCTCCTCCTGGAGCTGGAGCGCCTGGTGCTCCTGCACCTCCTGGACTTCCAGGTGGTGCACCTCCACCACCTGGAGGAGGGAGAGGGCGTGGACTTGCACGTTCTACAGGTGCAGCGGCAGCTCGAAAATCCTCCTTAAAGCCTCTTCATTGGAGTAAGGTATCAAGGGCATTGAAAGGAAGTTTATGGGAAGAATTACAAAGACTTGGAGAAACTCAAAGTGGACAAGAGTTTGACGTTTCAGAGATAGAGAAGCTTTTTGCTGCAAATGTTCCAAAACCAACTAAACCTGGAGGTCCGAGCAAACCAGCAGGAACCAAAACTGAAAAAATCACCTTGGTTGACATAAAGAGAGCCAATAATACTGAAATTATGCTCACAAAGGTTAAGATGCCACTTCCTGATATGATGGCTGCAGTGCTTGCTTTGGATGACTCGGTATTAGATGTTGATCAGCTGGAAAATCTTGTTAAATTTTGTCCTACCAAAGAGGAAATGGATCTTTTGAAGGGATATACTGGTGACAAGGAGCTTTTGGGAAAGTGTGAACAGTTCTTTTTGGAGCTAATGAAAGTGCCACGAGTGGAGTCGAAATTAAGAGTATTCTGTTTCAAGATTCAATTTCAGACTCAGATTACAGAGTTTAATAGGAGTTTAAACTTAGTGAACTCTGCATGTAACGAGGTCCGAAATTCACTCAAACTGAAGGAGATTATGAAGAAAATTCTTTATTTGGGCAATACATTGAATCAAGGAACAGCAAGGGGATCTGCTGTTGGATTCAAGTTGGATAGCCTTTTGAAGCTCACTGATACCCGTGCTTCTAACAGTAGAATGACACTGATGCATTATCTTTGCAAGGTCCTAGCTGAAAAGTCTCCTCCACTCCTTGATTTTCACCAAGACCTAGTTAGCGTAGAGACTGCCTCTAAGATTCAATTGAAAGCATTAGCAGAAGAAATGCAGGCAATTACCAAAGGACTAGAAAAAGTAAACCAGGAGCTTGCTGCATCTGAAAATGATGGCCCAGTGTCTGAAGTTTTCAGTAAGaCACTGAAAGGTTTCATTGATGAAGCCAAGTCTCAAGTGGATTCTGTAACACGCCTATATTCTGATGTGGGTAGAAATGCAGATGCACTTGCACTTTATTTTGGTGAGGATCCTGCCCGTTGTCCATTTGAGCAAGTTGCTGCAACTCTCTTAAATTTTATAAGGTTGTTTCTCAAAGCACATGAAGAGAATATCAAACAAGCAGAAGCAGACAAGAAGAAAGCTGAGAAAGAGgctgaagagaagaagaaagctgAGAAAGAGGCTGAGATGGAGAAGGCTAAAGGCAGTAACTTGACAAGGAAGAGTGAAAATGATAAAGAAGAAGGAAGCTGA 3966 0.4264 MALFRRFFYRKPPDRLLEISERVYVFDCCFSTDVLEEDEYKVYMGGIVAQLQDYYQDASFMVFNFREGDRRSQIADLLSLCDMTVMEYPREYEGCPLLPLEMIHHFLRSSESWLSLEGQQNVLLMHCERGGWPVLAFMLAGLLLYRKQYSGELKTLEMVYKQAPRQLLQLLLPLNPQPSQLRYLQYISRRHLGSEWPPSETPLYLDCLILRVLPLFDDGKGCRPVVRVYGPDPSNPANRSSKLLFSTPKNQTHVRHYLQAECMLVKIDIRCRVRGDVVLECIHLSEDFVREEMMFRVMFHTAFVRSNILVLNRDEMDMLWDTKDQFSKDFKSEVLFLDADAVIPDLTTVDVSGDENETESGSPDEFYEVEEIFSNIIDAQDSPRVRDSAVEDGSHKDIWNEYSDPHTLQDSTPDDGIHQQVGTTDSGINEVKDITVDDVNYKLDERVDSDTHVVKDIAVDDGYNTPSSIAVTFDMMETPERQEVTLDAHEELAVMQYNYDKDNNTPLKELEPEEGQQMHDLTGSMSVENNKDSHQDSLHVSYPTTRHNSLPTALLNATAAKEKMTNTEERLVSSSHVNEAVSVDMINDLKSCNGNNSKSLESIGEIDSNAQPSSIMPITESSHQTTTQAPQLSTDQMDLQAATPPPPPPPPPPFSGKNRGSSLPHWQPVCSSIDEIGENSGASPPLTPSIVGSAITSKASKLMGAVSLPYPPPPPPPPPSPPTKYVVTSVPPPPPPPPPPLSYLDRAPLFPPSTPTSLHTPPPLPLTPPPPHPSMGNAPPPPPPPFYGAPPPPPPMHGAQAPPPPPPPLGGGGPPPPPPGFRGPPPPPLPGGGGPPPPPLPGGGGPPPPPPPGGGGPAPPPPPGAGAPGAPAPPGLPGGAPPPPGGGRGRGLARSTGAAAARKSSLKPLHWSKVSRALKGSLWEELQRLGETQSGQEFDVSEIEKLFAANVPKPTKPGGPSKPAGTKTEKITLVDIKRANNTEIMLTKVKMPLPDMMAAVLALDDSVLDVDQLENLVKFCPTKEEMDLLKGYTGDKELLGKCEQFFLELMKVPRVESKLRVFCFKIQFQTQITEFNRSLNLVNSACNEVRNSLKLKEIMKKILYLGNTLNQGTARGSAVGFKLDSLLKLTDTRASNSRMTLMHYLCKVLAEKSPPLLDFHQDLVSVETASKIQLKALAEEMQAITKGLEKVNQELAASENDGPVSEVFSKTLKGFIDEAKSQVDSVTRLYSDVGRNADALALYFGEDPARCPFEQVAATLLNFIRLFLKAHEENIKQAEADKKKAEKEAEEKKKAEKEAEMEKAKGSNLTRKSENDKEEGS 1321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g01673 1321 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 13 188 IPR029021 -
Tsu03g01673 1321 Coils Coil 1174 1201 - -
Tsu03g01673 1321 MobiDBLite consensus disorder prediction 609 668 - -
Tsu03g01673 1321 SUPERFAMILY Formin homology 2 domain (FH2 domain) 969 1295 - -
Tsu03g01673 1321 PANTHER FORMIN-J 817 1310 - -
Tsu03g01673 1321 PANTHER FORMIN-J 1 751 - -
Tsu03g01673 1321 Coils Coil 1268 1312 - -
Tsu03g01673 1321 MobiDBLite consensus disorder prediction 1279 1321 - -
Tsu03g01673 1321 Gene3D - 205 336 - -
Tsu03g01673 1321 ProSiteProfiles C2 tensin-type domain profile. 200 339 IPR014020 -
Tsu03g01673 1321 MobiDBLite consensus disorder prediction 609 640 - -
Tsu03g01673 1321 SMART it6_source 561 1321 IPR015425 -
Tsu03g01673 1321 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 200 336 IPR035892 -
Tsu03g01673 1321 SMART PTEN_C2_2 198 338 IPR014020 -
Tsu03g01673 1321 MobiDBLite consensus disorder prediction 641 657 - -
Tsu03g01673 1321 MobiDBLite consensus disorder prediction 754 884 - -
Tsu03g01673 1321 Gene3D Protein tyrosine phosphatase superfamily 14 204 IPR029021 -
Tsu03g01673 1321 Gene3D Formin, FH2 domain 915 1307 IPR042201 -
Tsu03g01673 1321 ProSiteProfiles Formin homology-2 (FH2) domain profile. 896 1293 IPR015425 -
Tsu03g01673 1321 MobiDBLite consensus disorder prediction 707 746 - -
Tsu03g01673 1321 Pfam Formin Homology 2 Domain 902 1267 IPR015425 -
Tsu03g01673 1321 Pfam C2 domain of PTEN tumour-suppressor protein 199 336 IPR014020 -
Tsu03g01673 1321 MobiDBLite consensus disorder prediction 704 906 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g01673 Tsu-Chr3 16930268 16946063 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu03g01673 1 566 FH2 protein (formin) Gene Family AT5G07740 57.990 0.0 690
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g01673 - - cam:101505448 1057.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu03g01673 03 16930268 16946063 Tsu03g01673 03 16930268 16946063 ECH