Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g01665 ATGGCTTATTCAAACCCCACTCCTCCATATTATCCATATCCTAGTCAACATTCAAGTACTCTAACTTTTGTTTCATGGCCATATCCACATTATGCTCATGTTTCTCATGGTATTTACAACCACCTccaacaacaacagcagcaacaacCTCCACCAACACCACCCCCTACATTCAATCCAAGTTTTCCCTCATATCCACACCACCTCCTTCACCCATCATACCACACACCTCCAAACCTCACCCACATCACCCATTCTGCACCAGAATCCACCATGGCTTCACAAACACTATTTCTTCATCAACAACCAACTCACACTCCTATTTTCAACCATTCACAACCTGTTGCTGCAACAAAACCAAATCTTGAAATTCTTCAGAAATCCTTGATTGAGAttttagaaatttcaaaaaaacaaatgcaaAATGACCTGAAAGAATTTCAACATGAGATGAAAGAATCCTTTCTTGATATCAAAAAATCATTGCAAGCAGTTTCTGATTCATTTAAGGTAAAGACACGGGAAAGGAAATTACCAGAAAATATTGTTGAGGAAGAACCAGAGAAACAAAGAGCAGAGAAGGCTGTGTTGTTAGAGGTTGAACAAGCCATTGGCAGTATAAGTAATAGTTCACCTATGATTCATGAATGGATTACAGTAGATACCAGAGAAGCTCATGATCGAAAAGAACTGATCAAAGGTTTTAACTTTATAGATGAAAGGATAATGAACGGAAACTGGGTTAATGAGCCTCGTGTAGAAGTTATACAGAAGTTTTTCCAATTATTGGCTGTTTGTCATACTGCCATACCAGAAGTGGATGACGATACCGGAAGAGTCACGTATGAAGCTGAATCTCCTGATGAAGCAGCATTTGTGATTGCTGCAAGAGAAGTTGGTTTCACATTCTACAAAAGGAGTCAGAATAGTTTATCAATGAAAGAGTTGGATCCTGTTTCTGGCAATGAATGTATGTTTGAAAGGCTTGCGCTGAATGTGAGAGATTTTGAGGAGAAAACTTTGGAACATGTAGGTGAATATGCTGATGCAGGTCTAAGAATCCTGATACTAGCCTATCGTGAACTTGAGGAAGAAGAATATAAAGAGTTTGGCAATAAATTTATGGAAGTCAAAAAATCGATCACCGTAGATCGTGAGTCGCTGATTGAAGAACTATCAGATAAGATTGAGAGGAATCTAGTCCTTCTTGGTGCCACTGCTGTTGAAGACAAGCTCAAAGATGGGGTTCCTGAGTGTATTGAAAAGCTTGCGCAAGCTAGAATTAAGATATGGGTTTTGACTGGGTGGGGATAA 1314 0.379 MAYSNPTPPYYPYPSQHSSTLTFVSWPYPHYAHVSHGIYNHLQQQQQQQPPPTPPPTFNPSFPSYPHHLLHPSYHTPPNLTHITHSAPESTMASQTLFLHQQPTHTPIFNHSQPVAATKPNLEILQKSLIEILEISKKQMQNDLKEFQHEMKESFLDIKKSLQAVSDSFKVKTRERKLPENIVEEEPEKQRAEKAVLLEVEQAIGSISNSSPMIHEWITVDTREAHDRKELIKGFNFIDERIMNGNWVNEPRVEVIQKFFQLLAVCHTAIPEVDDDTGRVTYEAESPDEAAFVIAAREVGFTFYKRSQNSLSMKELDPVSGNECMFERLALNVRDFEEKTLEHVGEYADAGLRILILAYRELEEEEYKEFGNKFMEVKKSITVDRESLIEELSDKIERNLVLLGATAVEDKLKDGVPECIEKLAQARIKIWVLTGWG 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g01665 437 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 197 322 - -
Tsu03g01665 437 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 323 435 - -
Tsu03g01665 437 PANTHER PHOSPHOLIPID-TRANSPORTING ATPASE 197 322 - -
Tsu03g01665 437 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 235 366 IPR023299 GO:0000166
Tsu03g01665 437 Gene3D - 216 330 IPR023299 GO:0000166
Tsu03g01665 437 Gene3D - 331 410 IPR023299 GO:0000166
Tsu03g01665 437 Coils Coil 130 157 - -
Tsu03g01665 437 PANTHER PHOSPHOLIPID-TRANSPORTING ATPASE 323 435 - -
Tsu03g01665 437 SUPERFAMILY HAD-like 354 435 IPR036412 -
Tsu03g01665 437 MobiDBLite consensus disorder prediction 42 62 - -
Tsu03g01665 437 MobiDBLite consensus disorder prediction 48 62 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g01665 Tsu-Chr3 16785375 16790292 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu03g01665 197 435 Primary Pumps ATPases AT3G25610 53.763 5.78e-91 297
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g01665 K01530 - gmx:100776955 311.997