Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g01663 ATGGTACTAGGTGCTAATTTGGTGTTTATAATTGCTGTTCTTAATGCTGCAATTCAACTCAACTTGTTTGAAATCATAGCTAAAGAAAGTTCACCAAGTAATGGTGGATTCATTTCAACCTTTGAAATTGCTTCAAAGTTACCAACTCAACACTCTGACTTGCCTAATCGGCTCGACCGGATGTTGCACTTGCTTGCTAGCCACTCTCTTTTGTCTATTTACACTCGGACCGATGACGATGATGGTAGCTCGGTGAGAGCTTATGGTCTCACATCATCTGGTAAATACTTTGTTAATGGTGAAAATAATGATAGTGGCTATTTGGGTTCAATGGCATCATATGTCTCACCCTGCTTCCTTAGGGGGATATCAGCATATGGTTCCTCCGGTGAGATAATGCGTATTCTAGTGGTGGTTGTGAGTTTTATACAATGTGGAAATGATACCTGCAAAAATGTTAACACAATAATGCTTCTAAGATGTAGGGTCATTCCTGTGGAGTTCTTATCTCCAGAAGATGTAGGGTCAAAAAATGCTTTTAAGATGGTTTCAACAATCGATAACATCATGTTTATTACAACTGGTGGTAAGGAAAGAGCACTACAAGAATATGAGAGTTTAGGTCAAGAATCTGGATTTTCTAAACATGGAGTGATAGAACTATACAAGTAA 672 0.3839 MVLGANLVFIIAVLNAAIQLNLFEIIAKESSPSNGGFISTFEIASKLPTQHSDLPNRLDRMLHLLASHSLLSIYTRTDDDDGSSVRAYGLTSSGKYFVNGENNDSGYLGSMASYVSPCFLRGISAYGSSGEIMRILVVVVSFIQCGNDTCKNVNTIMLLRCRVIPVEFLSPEDVGSKNAFKMVSTIDNIMFITTGGKERALQEYESLGQESGFSKHGVIELYK 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g01663 223 PANTHER O-METHYLTRANSFERASE 152 220 IPR016461 GO:0008168
Tsu03g01663 223 Gene3D Vaccinia Virus protein VP39 161 218 IPR029063 -
Tsu03g01663 223 Gene3D - 1 97 IPR036388 -
Tsu03g01663 223 PANTHER O-METHYLTRANSFERASE 1 116 IPR016461 GO:0008168
Tsu03g01663 223 SUPERFAMILY "Winged helix" DNA-binding domain 8 101 IPR036390 -
Tsu03g01663 223 PANTHER CAFFEIC ACID O-METHYLTRANSFERASE 1 116 - -
Tsu03g01663 223 PANTHER CAFFEIC ACID O-METHYLTRANSFERASE 152 220 - -
Tsu03g01663 223 Pfam Dimerisation domain 13 66 IPR012967 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g01663 Tsu-Chr3 16773599 16774518 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu03g01663 1 102 Monolignol Biosynthesis Gene Families AT5G54160 42.157 3.06e-13 65.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g01663 - - lja:Lj1g3v2994540.1 124.02