Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g01599 ATGGATTCTCTCAAAATTTTCAAAGGCTATGACAAAGTTGAACACAACCTCGAAGAtccacaaaaacaacaacaacatcgaCACAAAATCTCCAAACCCCTCATCGCCACAATttccatcatcatcaccatcctCTTCCTTACTTTCACTCTATCTTTCACCCTTTTCTACCACCACCACACCAACTCAACCGAGTCAAAAACTCCTCTCAACTCACTCAACTCAACCGACTCAATCCGATTCATTTGCAACGTAACTCGTTTCCCTGACTCATGTTTCACCGCCATATCATCCTCCACACAAAACCCCACCGACCCAAAAACCATACTCAAAATCTCAATCCTCGCATCCATTAACGAACTCAACAAATTCTCTTCATCGTTAAAAGCCAACTCCAATGGACACGCGCTTGGTGATTGCAATGAACTGATTGATGACGCGGTGAGTCGACTCAACGATTCTGTTTCGGTTTTTTCTGATGGCGGTTTAACGTTGACGGACGTTAAAATTAACGATATTCAGACGTGGGTTAGTGCTGCGTTGACGGATCAACAAACGTGTGTTGATGGGTTAGAAGAAGTTGGGTTTTCGTTGAATAGTGTTGAAAAGGTAAAGAAAATTATGCAAAAATCAAGTGAGTATATTAGCAATAGTTTGGCTATTGTTGCTAATATACGCAATTTGGTAAAGGTGCCACTACATTGA 705 0.3872 MDSLKIFKGYDKVEHNLEDPQKQQQHRHKISKPLIATISIIITILFLTFTLSFTLFYHHHTNSTESKTPLNSLNSTDSIRFICNVTRFPDSCFTAISSSTQNPTDPKTILKISILASINELNKFSSSLKANSNGHALGDCNELIDDAVSRLNDSVSVFSDGGLTLTDVKINDIQTWVSAALTDQQTCVDGLEEVGFSLNSVEKVKKIMQKSSEYISNSLAIVANIRNLVKVPLH 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g01599 234 TIGRFAM PME_inhib: pectinesterase inhibitor domain 43 224 IPR006501 GO:0004857
Tsu03g01599 234 SMART PMEI_2 74 221 IPR006501 GO:0004857
Tsu03g01599 234 CDD PMEI-like_3 82 225 - -
Tsu03g01599 234 PANTHER PECTINESTERASE 3 226 - -
Tsu03g01599 234 Gene3D Invertase/pectin methylesterase inhibitor family protein 73 227 IPR035513 -
Tsu03g01599 234 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 77 225 IPR035513 -
Tsu03g01599 234 Pfam Plant invertase/pectin methylesterase inhibitor 78 221 IPR006501 GO:0004857
Tsu03g01599 234 PANTHER PECTINESTERASE 1-LIKE 3 226 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g01599 Tsu-Chr3 15773639 15774575 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu03g01599 1 234 Carbohydrate Esterase AT1G53840 33.597 3.10e-32 121
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g01599 - - aprc:113852848 199.904