Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g01598 ATGTCTAGTAGGAGGTCACGGTCAAGGCAAACAAGTAGTTCAAGGAATATCACTGATGATCAGATCCATGATCTTGTCTCCAAGTTGCAGCAACTTCTTCCTGAGATTCGCAACCAGAGCTCCGACAAGGAAGAAATGGTTGGTCTCGATGAGGGTCATTCCAGTCTCGTCGTTTGGGAAGGGTCTAGATGGAGTGGACCAGTCATTTTCGGAGTTGGTGTTTCAAAGCATGGAGCTCTTTTGCTTGGTGAGCAAAGTTGA 261 0.4674 MSSRRSRSRQTSSSRNITDDQIHDLVSKLQQLLPEIRNQSSDKEEMVGLDEGHSSLVVWEGSRWSGPVIFGVGVSKHGALLLGEQS 86
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g01598 86 MobiDBLite consensus disorder prediction 1 20 - -
Tsu03g01598 86 PANTHER TRANSCRIPTION FACTOR PRE3 1 43 - -
Tsu03g01598 86 PANTHER TRANSCRIPTION FACTOR PRE 1 43 IPR044293 GO:0006355|GO:0040008|GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g01598 Tsu-Chr3 15749217 15751366 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu03g01598 1 38 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G47710 65.789 6.26e-09 47.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g01598 - - gmx:100787967 65.0846