Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g01595 ATGGATTACTACAACATCCTAAAAGTGAATCGAAATGCAACCGAAGACGATTTAAAGAAATCATACAAAAAACTTGTATTAGTATGGCATCCAGACAAAAACCCTAACAACAAACCCGACGCTGAAGCCAAATTCAAACTCATTTCTGAAGCTTATGATGTTTTAAGCGATCCACAAAAGCGTAAGATCTATGATCGTTACGGTGAAGAAGCGTTAAAATCCGGTGAAGTTCCTCCACCATCTCAGAAACATTCTTCTTATgctgcttcttcatcatcttcttcgtCTTCGCGGCCTTATCGGAATAAACACCCTCAGAATAATACGTCGTCGTTTAAGTTTAATCCTAGGGATGCGGAAGATATTTATGCTGAGATCTTTGGTGAAGGTGGTCCGGATTTTGAGGGGAATCGTAGGACATCGAATGGTGTACCGCCgactggtggtggtggtggtcaGGCAAGGAGGAAGGCCTCTCCTGTTGAGAGGACGTTGCTTTGTAGTTTGGAGGATCTTTATAGAGGGGTTGataagaagatgaagatttctAGGACAATTACTGATTTTTTTGGGAAGAGTCGGACTGAGgatgagattttgactattaaGCTAAAACCTGGCTGGAAAAAAGGAACAAAGGTTACCTTCCCAGAGAAGGGTAACCAGGAGCATGGTGTCATCCCGGCAGACATTATTTTTGTAATTGACGAGAAACCACATGCTCAATATACAAGGGATGGTCATGATCTGATTATTAACCAAACCATAAGTCTTGTCGACGCTCTTACAAATAAAACGTTACAAATCCCCACCTTGGATGGAAGGAATCTCATGGTCCCATTGCCAGGTATAGTCACACCTGGCTATGTGCACGAAGTCCCAAACGAAGGAATGCCTATATCTAGAGAACCTGGGAGGAAAGGGGTTTTGAAAATTAAGATTGATGTCAAGTATCCCACGAGTCTAACTCCTCAGCAAAAATCTGATCTAAGGAGAGTTTTAGGTTGA 1008 0.3869 MDYYNILKVNRNATEDDLKKSYKKLVLVWHPDKNPNNKPDAEAKFKLISEAYDVLSDPQKRKIYDRYGEEALKSGEVPPPSQKHSSYAASSSSSSSSRPYRNKHPQNNTSSFKFNPRDAEDIYAEIFGEGGPDFEGNRRTSNGVPPTGGGGGQARRKASPVERTLLCSLEDLYRGVDKKMKISRTITDFFGKSRTEDEILTIKLKPGWKKGTKVTFPEKGNQEHGVIPADIIFVIDEKPHAQYTRDGHDLIINQTISLVDALTNKTLQIPTLDGRNLMVPLPGIVTPGYVHEVPNEGMPISREPGRKGVLKIKIDVKYPTSLTPQQKSDLRRVLG 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g01595 335 PANTHER DNAJ HOMOLOG SUBFAMILY C MEMBER 1 334 - -
Tsu03g01595 335 SUPERFAMILY HSP40/DnaJ peptide-binding domain 160 240 IPR008971 GO:0006457|GO:0051082
Tsu03g01595 335 Gene3D - 239 334 - -
Tsu03g01595 335 ProSitePatterns Nt-dnaJ domain signature. 45 64 IPR018253 -
Tsu03g01595 335 SUPERFAMILY Chaperone J-domain 1 79 IPR036869 -
Tsu03g01595 335 ProSiteProfiles dnaJ domain profile. 2 68 IPR001623 -
Tsu03g01595 335 Pfam DnaJ domain 2 65 IPR001623 -
Tsu03g01595 335 SMART dnaj_3 1 60 IPR001623 -
Tsu03g01595 335 PANTHER DNAJ HEAT SHOCK FAMILY PROTEIN 1 334 - -
Tsu03g01595 335 PRINTS DnaJ domain signature 4 22 IPR001623 -
Tsu03g01595 335 PRINTS DnaJ domain signature 22 37 IPR001623 -
Tsu03g01595 335 PRINTS DnaJ domain signature 40 60 IPR001623 -
Tsu03g01595 335 PRINTS DnaJ domain signature 60 79 IPR001623 -
Tsu03g01595 335 MobiDBLite consensus disorder prediction 79 115 - -
Tsu03g01595 335 Gene3D DnaJ domain 1 139 IPR036869 -
Tsu03g01595 335 CDD DnaJ 2 57 IPR001623 -
Tsu03g01595 335 CDD DnaJ_C 159 322 - -
Tsu03g01595 335 Gene3D - 160 238 - -
Tsu03g01595 335 Pfam DnaJ C terminal domain 162 319 IPR002939 -
Tsu03g01595 335 MobiDBLite consensus disorder prediction 71 115 - -
Tsu03g01595 335 SUPERFAMILY HSP40/DnaJ peptide-binding domain 243 328 IPR008971 GO:0006457|GO:0051082
Tsu03g01595 335 MobiDBLite consensus disorder prediction 127 159 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g01595 Tsu-Chr3 15724977 15728777 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu03g01595 2 111 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT5G64360 31.250 2.50e-08 53.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g01595 K09510 - gmx:100781572 437.187
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu03g01595 03 15724977 15728777 Tsu03g01595 03 15724977 15728777 ECH