Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g01590 ATGGCTAATATTGAACCAAAACATGTGGTTGTGATACAAGATGCATCTAAGCTAAACTTTAAAGTATTTTCTTGGATTATAAATGGATTATCACTCAATCCAGCAGATAGGGTCACCCTATTTGCAATCCTGTATGAAGTTTACAATCCTATGGGGTATAAAAGCACATTAGACAACAATGGACTAGTTGGAGTAAACCAAAGGATCATTGAGGAAGAACTTGCAAGGAAGAAGGAAGAGTATCTTAACCATGAAGAGCTTGCAAGGATTGCTAAATTGTATGAATCAAGTGagGTTGTATTTAAGATACAGTTGTATGCAGGATCTTCACCAAAAAAATTTGCTATAGAAGGAGCCAAAAACCTAAATGCAACTTGGGTTATACTCGACAGGCAAATGAAGAAAGATGAGGAGTTTTTCCTGCAGAAGCTTTATTGTGGTATATCTAGAATATTGGGTAAAACTCGCATCGAACGCCTAAGGGGACCTATTCAATTCGCAGTTGAAATACAATGCAACAGCGATCATCCTTCTGCTGAAAGTTTACTAGAAAGTATATGTGGAGATGTCCCCAAGAGTCCAATCAATGTCGAAGGGACGAGTCAGATTCATTGGAGGCCCAATAAGGATGAGGGGTGCTCAACATTCAGTCCTGACATTAATGAAAAAACATGTGAGACAAGTACTGATCATGCTAGCATGGACGAAACTGATATAAACAGAAACCAAATCATCGACAAAACAGGAGATAGGGACACAACACTTGTGGCTAACAATGATCAAACAAAAGATCTTCATATGAGCCAAGCTCAAACAAGAAATGACTCTGTGTGTTCTATGTGCTCCGTTTGCAAAACAAGAAGACCTAATATTGAATGGCAAAAGGAATTTACTTATGAAGAAATTGAATCCGCCACAGAAGGATTTTCGTTGAAGAATTGTCTCTCTGAAAGTGGAAATCCATTCTCCACTTTCAAAGGCAAGCTAGAGGGAGAGGTGAAAATAGTAGTTAAGCAGCATGAAATAACAAACATTGAAGTAAGAGAAAAAATGAAGTCAGAAGTCCAAACCATTCTCAAAGCTAGACATAACAATGTGGTCATGCTATTAGGTTCATCTAGGAAAGACCGTTTCATGTTGATTGTATATGAGTATGCATGCAATGGTTCACTTGACATGTATCTATCAAGTGAAAGATGCAGACCATTGGACTGGAGTGAAAGGCGGAGAGTGGCAATAGGTCTTTGCAGAGGTCTAAAGTACTTACATGATAATAACATTATTCATGGAAATATAAAACCAAGCAATATTCTTCTAACACATGACTTCAAACCACTGCTTGGAGATTTTGACCTTGGAAAAAAACTCGATGCGAAGAAGTCCTTCAATAATAAAAGCATAGGGAATTCTGAATACATAGCACCGGAGTATCTGGAGAAAGGGAAACTATCGACAAAAACAGATGTATACTCGTTTGGTGTGGTTATTTTAGAGTTGATTACAGGACGCAAAGCCACAGATAAAATATCAGGAGAGAAAAGACTTGTTGGATGGGCAAAGCCTCTTCTAGGAGGTAAGAACTATTCGGAGTTGGTGGATCCTATAATAAGCAAAACATATGAAGAAGACCAACTTCATTGGTTGGTACAAGTAGTGTCAAAATGTCTCAAAAAGAAGCCTAAGGAAAGATTATCTATGAACATGGTTGTATCGGCATTACAAGGCATAGCTGATAGCGAACAATGCAACATTACAGAAGTCTCAACTTCACCAATATCAGATTCGAGAATTGTGTCTGATATCAATGGTTCACAAGTTATATTACAAGGAATATCAGACAGAAAACAGTGCGACATGACGGAGGAATCTCTTGCAGTTgtaacaaattcaaaatttgtgtCGAACGTAAGTGATTTACAAGGTAACAAAGAAGTATGTCCAAAAGAAACTGATTGCCGAAGTCAGAAAGTTGTGCAGATAGAGCGCATTCCCTTTGAGGAAGAAAGTAGGCCCCAAAGTTTGGACTTAAAAAGCGCGATAACAAATCACTTGAGTGAGTTTGAAGAAAATCTGAAGAGAAACCGCGATGAGAATGCAATTTCAACACAAGAAATTAGTATTAACCTCATGATTGGTAAGGATCAGGAAGATAAGAGCTCTATTCAAGTGAAAAGAGGCTTAAGACCAGTACCTATTAGTGGAATTTTACTTCAAACACAATCGCAGAGTAGCTTCAATGAGAATTTACATGATGAACATCAAGATGAAGTCATTGTAGAGAAATCAAAATCCTCTGCATGCTCTATTTGCAAAAGTAAACGACCGAAAATCACAAGGATGAAAGACTTTACTTATGATGATCTCCTAGCAGCTACTAAAGGATTTTCAGTTGAGAACTCTCTATCAGAAAGTGAAAATGGACCTACTTTTAAAGGCTTTCTagagaataaaatgaaaatagttGTTAAGATACATCAAATTACTAGGTCTCAAGAAGAGAATATTTTCAGGTCAGAAATCCAGTTGTTCACCAATGTTAGACACAGAAATGTGGTCATGCTGTTGGGATTATGTACAGAGAAAAGTCAACTGATGATTGTGTATGAACATTTATGCAATGGTTCTCTTGACCATTACCTTTCAAGGGGAAGTTTCCAGTCATTGACATGGAAGGAAAGAATGAAAATAACCATAGGTACTGCAAGAGGTTTAAAATACCTACATGGGAATAACATAATTCATGGAAATATAAAAGCATGTAACATTCTTCTAACACATGACTTTGAACCACTGATTGGAGATTTCGGCTTCAGAAAAACGAAGCTTGAACAGAAGAAGTCCTACAAAGATAAAAGTGCAAAAGATTTTGGATACACAGCACCCGAGTATACGGAGAATGGGAAATTATCAACTAAGATAGATGTATACTCCTTTGGAGTGGTTCTTTTAGAGCTGATCACCGGCCGGAGGGTAACGGACAAATTACCAGGAGGCAAAAGCCTTGTTGGATGGGCAAAGCCACTACTGGGAGGAAAGAAGTATGCACAGTTAGTGGATTCAAAAATCAGTAACTCCTATGAACAAGAAAAACTTCAATGGTTAGTCCAAGTAACAGAAAAATGTCTCAAAAAGAATCCTAAGGAAAGATATTCCATGAATATGGTTATGTCTGCATTACAAGGCATCTCAGAGTCAGATGATTGTTGTCTAATCGAAGATTCTTCATCAGAAAACTCATATTTACCAAATGATGAGCCGGTCATGCCCACGACTAGTTCACAAGGTGAAACGATGGTTGATTTGGTAATCCGGGAAGCAAAACGGATTGACACAAACACATACAAGGAAGAGACAAGCTTTAAAACAGAAACTACAACTAATGACATGATTGAACATATCAAGAAAAACCATCAAAATAAAGAAAGCTTCCACATGGAAGAGAATGAGGTAGAGAGAAAAGCAGTAGATAACCAACAAAAGATTATCCAGGACACAGAACAAATGCAAGACAGCTGTAATGATACAGGTTTTTGGAATGAGAATCAAGACAAAACAATTTTGGAGAATATTTCAAAGTCTACTTTATGCTCAATCTGCAAAAGTAGACGGCCAAATCATGAGTTGCAAAGGAAATTTACTTATGAAGAACTTCAAGCTGCTACAGAAGGATTTTCAATAAAGTATTCTCTATCTGAAGGTGAATATGGACCTGCCTTTAAAGGTCAGTTAGATAATAAGCTGGAAATAGCTATTAAGAAAATTCAAGTCACAAGCTTACAGGAACAGAAGGAGTTTATGTCAGAAGTCCAGTTGCTCGTAAATACAAGACATGAGAACATGATCATGCTTCTAGGTTCATGTATACGACAAAATCAATTGCTGGTCGTATATGAGTATGCATGCAACGGTTCGCTTGATCAGTACTTATCAAGGCAAAGTGGTAGATTTTTGACTTGGAGAGAAAGGATGAAAATTGCAATAGGTGTATCAAGAGGCCTGAAATATCTTCATGAGAATAACATAATACATGGAAGAGTAAAACCAAGTAACGTTCTTCTAAATCATGACTATAAACCATTGCTCGGAGATTTTGTGTTTAGAAAAGATGGACGTGAATTGAAGAATAGCTGCAAGGATAAAAGTGTTAGGAATTGTGGATATACTGCACCAGAGTGTAAGGAGAGTGGAAAACTATCAACAAAAGCAGATGTCTACTCTTTTGGAGTAGTTCTTTTAGAGTTGATCACAGGCTCGATGGTTTCAGATAAGATACATGGACAGAAATGTCTTATTGAATGGGCAAGGCCACTTCTTGGAGGAAGGGAGTACTTACAGTTGATGGATCCCGAAATCAGCAGCTCATATGATGAAGAAGAACTTGCTGCATTGGTCCTAATAACAGAAAAGTGTCTCAGAAAGAATCTCAAGGAAAGATTTACAATGAATATGGTGGTCTCTTTAATGCCCTCTGTAGTTGATAGCAATAACATCTACCTAATTGAAGACTCTTCATCAGATTCAGATGACTTATGTTGCTATTCAGATGAAACAAactcagaagaagaagatttagTCACAAAGATTGGTGAATTAAGAGAGGACAACAAGACATGTAGAAAAGAGaatgaaacaaaatttgatgaaaaGAGTGATTGGTACAAAACTAGAGGCAAAAATCTTATGGaaacacaagaaaaagaaagatgtGAATCTTATGGTGGAGCTAAAGACTTTTTTCTAGATGGAGCTCAAGAATATATAGCATGTGGAGAATTTTTTAGCTTGTGTAATTCAATTTAA 4800 0.3644 MANIEPKHVVVIQDASKLNFKVFSWIINGLSLNPADRVTLFAILYEVYNPMGYKSTLDNNGLVGVNQRIIEEELARKKEEYLNHEELARIAKLYESSEVVFKIQLYAGSSPKKFAIEGAKNLNATWVILDRQMKKDEEFFLQKLYCGISRILGKTRIERLRGPIQFAVEIQCNSDHPSAESLLESICGDVPKSPINVEGTSQIHWRPNKDEGCSTFSPDINEKTCETSTDHASMDETDINRNQIIDKTGDRDTTLVANNDQTKDLHMSQAQTRNDSVCSMCSVCKTRRPNIEWQKEFTYEEIESATEGFSLKNCLSESGNPFSTFKGKLEGEVKIVVKQHEITNIEVREKMKSEVQTILKARHNNVVMLLGSSRKDRFMLIVYEYACNGSLDMYLSSERCRPLDWSERRRVAIGLCRGLKYLHDNNIIHGNIKPSNILLTHDFKPLLGDFDLGKKLDAKKSFNNKSIGNSEYIAPEYLEKGKLSTKTDVYSFGVVILELITGRKATDKISGEKRLVGWAKPLLGGKNYSELVDPIISKTYEEDQLHWLVQVVSKCLKKKPKERLSMNMVVSALQGIADSEQCNITEVSTSPISDSRIVSDINGSQVILQGISDRKQCDMTEESLAVVTNSKFVSNVSDLQGNKEVCPKETDCRSQKVVQIERIPFEEESRPQSLDLKSAITNHLSEFEENLKRNRDENAISTQEISINLMIGKDQEDKSSIQVKRGLRPVPISGILLQTQSQSSFNENLHDEHQDEVIVEKSKSSACSICKSKRPKITRMKDFTYDDLLAATKGFSVENSLSESENGPTFKGFLENKMKIVVKIHQITRSQEENIFRSEIQLFTNVRHRNVVMLLGLCTEKSQLMIVYEHLCNGSLDHYLSRGSFQSLTWKERMKITIGTARGLKYLHGNNIIHGNIKACNILLTHDFEPLIGDFGFRKTKLEQKKSYKDKSAKDFGYTAPEYTENGKLSTKIDVYSFGVVLLELITGRRVTDKLPGGKSLVGWAKPLLGGKKYAQLVDSKISNSYEQEKLQWLVQVTEKCLKKNPKERYSMNMVMSALQGISESDDCCLIEDSSSENSYLPNDEPVMPTTSSQGETMVDLVIREAKRIDTNTYKEETSFKTETTTNDMIEHIKKNHQNKESFHMEENEVERKAVDNQQKIIQDTEQMQDSCNDTGFWNENQDKTILENISKSTLCSICKSRRPNHELQRKFTYEELQAATEGFSIKYSLSEGEYGPAFKGQLDNKLEIAIKKIQVTSLQEQKEFMSEVQLLVNTRHENMIMLLGSCIRQNQLLVVYEYACNGSLDQYLSRQSGRFLTWRERMKIAIGVSRGLKYLHENNIIHGRVKPSNVLLNHDYKPLLGDFVFRKDGRELKNSCKDKSVRNCGYTAPECKESGKLSTKADVYSFGVVLLELITGSMVSDKIHGQKCLIEWARPLLGGREYLQLMDPEISSSYDEEELAALVLITEKCLRKNLKERFTMNMVVSLMPSVVDSNNIYLIEDSSSDSDDLCCYSDETNSEEEDLVTKIGELREDNKTCRKENETKFDEKSDWYKTRGKNLMETQEKERCESYGGAKDFFLDGAQEYIACGEFFSLCNSI 1599
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g01590 1599 PANTHER OS01G0253100 PROTEIN 84 191 IPR045271 GO:0004714|GO:0006468
Tsu03g01590 1599 PANTHER OS01G0253100 PROTEIN 1179 1510 IPR045271 GO:0004714|GO:0006468
Tsu03g01590 1599 PANTHER OS01G0253100 PROTEIN 263 594 IPR045271 GO:0004714|GO:0006468
Tsu03g01590 1599 PANTHER OS01G0253100 PROTEIN 575 1148 IPR045271 GO:0004714|GO:0006468
Tsu03g01590 1599 Gene3D Transferase(Phosphotransferase) domain 1 387 595 - -
Tsu03g01590 1599 Gene3D Transferase(Phosphotransferase) domain 1 871 1079 - -
Tsu03g01590 1599 Gene3D Transferase(Phosphotransferase) domain 1 1301 1508 - -
Tsu03g01590 1599 Coils Coil 684 704 - -
Tsu03g01590 1599 Coils Coil 67 87 - -
Tsu03g01590 1599 SUPERFAMILY Protein kinase-like (PK-like) 1207 1486 IPR011009 -
Tsu03g01590 1599 ProSiteProfiles Protein kinase domain profile. 299 576 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu03g01590 1599 SUPERFAMILY Protein kinase-like (PK-like) 778 1064 IPR011009 -
Tsu03g01590 1599 PANTHER DUAL-SPECIFICITY KINASE DOMAIN PROTEIN 84 191 - -
Tsu03g01590 1599 PANTHER DUAL-SPECIFICITY KINASE DOMAIN PROTEIN 1179 1510 - -
Tsu03g01590 1599 PANTHER DUAL-SPECIFICITY KINASE DOMAIN PROTEIN 263 594 - -
Tsu03g01590 1599 PANTHER DUAL-SPECIFICITY KINASE DOMAIN PROTEIN 575 1148 - -
Tsu03g01590 1599 Gene3D Phosphorylase Kinase; domain 1 284 385 - -
Tsu03g01590 1599 ProSiteProfiles Protein kinase domain profile. 1224 1491 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu03g01590 1599 Pfam Protein tyrosine and serine/threonine kinase 798 1058 IPR001245 GO:0004672|GO:0006468
Tsu03g01590 1599 Pfam Protein tyrosine and serine/threonine kinase 1226 1485 IPR001245 GO:0004672|GO:0006468
Tsu03g01590 1599 Gene3D Phosphorylase Kinase; domain 1 1185 1299 - -
Tsu03g01590 1599 Gene3D Phosphorylase Kinase; domain 1 754 870 - -
Tsu03g01590 1599 SUPERFAMILY Protein kinase-like (PK-like) 293 595 IPR011009 -
Tsu03g01590 1599 ProSiteProfiles Protein kinase domain profile. 795 1062 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu03g01590 1599 Pfam Protein kinase domain 333 570 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g01590 Tsu-Chr3 15658376 15668209 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu03g01590 297 596 Trihelix Transcription Factor Family AT5G38560 37.580 1.14e-53 199
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-2 Tsu03g01590 PK_Tyr_Ser-Thr 1.8e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g01590 - - mtr:MTR_0205s0040 2268.43