Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g01576 ATGGACTTTGGAGAAACTTTATTCACTTCAATAAATGAAGTTCCTAATCCATATAACCTTTCACATTATCAAACATACAATGTATGTGTTGAACCACCAAAAATGTTAATATCTGAAGGGATATGGGTTAGTCACACTGCACTCCCTGTTAAATCTCCATTTACAATGTTGGAAATTCAAATAATTACCATTGTTTTCATCACACAATTCATACATTTCTTTCTCAAGCGCTTTGgatgttcttattttatttcacAAGCCATGaCTGGGTTTCTTCTGGGTCCGTCGATACCGACAGGACCActagaaaaatacaaaaagttgTTATTCCCATTTGGTGGTCCGGATATGCTAAACACCATATCATGCTACGGCtacatatttttcttatttctaaATTCTGTTAAAATGGACTTCGCCTTAATAACAAAAACAGGCAAAAAACCATGGGTAATTGCTCTTCTCTCGTATTTCGGAACCTCTATAATCAgcttcatcttctttctttatACCCGCCATATTTGGTTAGATTTAATTGGCGATGGAGAAACATTCGGTTTACCTATGGTCTTTGTATCTCATAGCGGTTGTTCTTTCGCTGTGATTGCTTCTCTCCTAAGCGATCTTGGAATCCTCAACTCGGAACTTGGGCGCCTTGCAATGTCATCGGCTTTTCTTATCGACCTCTCAGGAGGTGTCTTAGCGGGTTTAGGAACCGCCCTTTGGGGTGCCATTGAGGGAGGAATGTTAATGGCTATTAGAAACTTAtttctattcattttttatCTGATTGGGATTCCATTAATTGGGAGAccaataatgatgttgatggtGAAAAATACACCAGAAGGGAAACCAATTAACAAGATATACATACACTTCATTGTGTTTGCTTTATTCATGTTAGGTATATTAGCTGGAGAATTCAAACAACCTTTTTTGGCAGGTGCCATTGTATTAGGCCTTGCAGTTCCTGAAGGACCACCATTAGGGTCAGAGTTAGTTAACCAATTTGACTTGTTCTCTACATGGATTCTCACACCTATTTTTGTGACTTGTTGTGTAATGAAAGTGAATTTAACTAAATGTGGACCTCCTATTGTTATTGTTGTCATCACTGGATTCATCATTATGGTGCATACTATTAAGCTATTTCAGTGTTTCATTGTTTGCAAATATTGCAATATGCCTTCAAGTGATGGTCTTTGCCTTGCTCTCATTTTGAGTTGCAAAGGTGTCATTGATACTTGCTCCTTCGTTCTTGTCTACGACGGAATGaGACAATCTCAACAAGCAATAGGTGTTATGGTAATATCAACCTTAATCTTGGCAACAATCTCAAGAACCGGAGTGAAATTATTGTACGATCCATCAAGAAAATATGCAGGAtatcaaaaaagaaacataatgAATCTAAAACAAAACACGGAGCTTCGTTTAGTTGCGGTTGTACACAGGGCAATTCACATGGTTCACATCAAGAATTTCCTAAGCCTTTGCTCTCCTGCATCGGACAACGCAATTGTTGCAGACGTGTTATATTTGATGGAATTAATTGGAAGAACAACACCAATTTTCATATCACATCGTCTCCAACAAAGAAAACGATCTACACATGACTACTCTGGAGAATTAGTTGTTACATTCGACCTTTTTGAGCGTGACCATGCAGGTTCAGCAACAGTTAACACATACACAGCAATATCACCAACAACATCTATGCCAGAAGATGTTTGTTACCTTGCATTAGACAAAAATGCAGCTATTATAATTCTACCATTCCACATAAGATGGTTACAAAATGGTTCAATTGAATCACAAGACAAAAATGTAAGATCATTGAATTCAAAGGTTTTAGAAAGAGCACCTTGTTCAATTGGGATTTTGGTTGACCGTGGTTCCGCAACCAaattttcacatatttataaAGTAGCTATGATTTTCCTCGGTGGTCCAGATGATAGAGAAGCGTTGCATTTGGCTAGAAGGTTTTCTAAAAATGTAGACAACACtttgtttatttatagattGCTTTCTTCTGATCACGATTCAACCGGTTGGGAGCAAATGATCGATGATGAGGAGTTAAGGCAAGTGCGCGGAGCTTATGTTAAACTCGAAAATAATGTCAAGtatgaagagaaaaatatagaGGATGCATCTCAAACAACCAATTTTATAAGGGAAATTTccaaaaattttgatttttttatagttgGGAGACGTAATGGACTTAAATCTCCTCAAACAATTGGTTTGGAAAATTGGACTGAATATCCTGAATTAGGAGTGATTGGTGATTTGCTAGCTTCACGAGATATGGAAAGTAATGCTTCAATTTTAGTtgtgcaacaacaacaacaacccaaGTGA 2373 0.346 MDFGETLFTSINEVPNPYNLSHYQTYNVCVEPPKMLISEGIWVSHTALPVKSPFTMLEIQIITIVFITQFIHFFLKRFGCSYFISQAMTGFLLGPSIPTGPLEKYKKLLFPFGGPDMLNTISCYGYIFFLFLNSVKMDFALITKTGKKPWVIALLSYFGTSIISFIFFLYTRHIWLDLIGDGETFGLPMVFVSHSGCSFAVIASLLSDLGILNSELGRLAMSSAFLIDLSGGVLAGLGTALWGAIEGGMLMAIRNLFLFIFYLIGIPLIGRPIMMLMVKNTPEGKPINKIYIHFIVFALFMLGILAGEFKQPFLAGAIVLGLAVPEGPPLGSELVNQFDLFSTWILTPIFVTCCVMKVNLTKCGPPIVIVVITGFIIMVHTIKLFQCFIVCKYCNMPSSDGLCLALILSCKGVIDTCSFVLVYDGMRQSQQAIGVMVISTLILATISRTGVKLLYDPSRKYAGYQKRNIMNLKQNTELRLVAVVHRAIHMVHIKNFLSLCSPASDNAIVADVLYLMELIGRTTPIFISHRLQQRKRSTHDYSGELVVTFDLFERDHAGSATVNTYTAISPTTSMPEDVCYLALDKNAAIIILPFHIRWLQNGSIESQDKNVRSLNSKVLERAPCSIGILVDRGSATKFSHIYKVAMIFLGGPDDREALHLARRFSKNVDNTLFIYRLLSSDHDSTGWEQMIDDEELRQVRGAYVKLENNVKYEEKNIEDASQTTNFIREISKNFDFFIVGRRNGLKSPQTIGLENWTEYPELGVIGDLLASRDMESNASILVVQQQQQPK 790
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g01576 790 Gene3D - 56 461 IPR038770 -
Tsu03g01576 790 Pfam Sodium/hydrogen exchanger family 62 447 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Tsu03g01576 790 Coils Coil 703 723 - -
Tsu03g01576 790 PANTHER CATION/H + ANTIPORTER 15 788 - -
Tsu03g01576 790 PANTHER CATION/H+ EXCHANGER 2 15 788 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g01576 Tsu-Chr3 15572173 15574999 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu03g01576 54 787 Antiporter Super Family AT5G22900 35.924 1.65e-148 454
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g01576 - - gmx:100797272 978.778